Harmonia axyridis (harlequin ladybird): 123673641
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Entry
123673641 CDS
T10650
Name
(RefSeq) probable DNA mismatch repair protein Msh6 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
haxr Harmonia axyridis (harlequin ladybird)
Pathway
haxr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
haxr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
123673641
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haxr03400
]
123673641
DNA repair and recombination proteins [BR:
haxr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
123673641
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_29
AAA_27
DUF2541
Motif
Other DBs
NCBI-GeneID:
123673641
NCBI-ProteinID:
XP_045464180
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Position
2:complement(34903281..34915374)
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AA seq
1128 aa
AA seq
DB search
MSKTPKRKSLGGQSNTLFSYFKSPKVEKKDDSIVKKIEKPISEYNSDDEDIVRCKKRKRI
IIQSDSEDEAELAGKKAAKIEKTARNNSKSEDSSDVEPESSSGNIDSESPENEGKANKGK
NSSTNGNVELKGSLEKYSFEYNQTVDKNKQSCEALNDSQIALKSSTPADVIVSIHNNWKH
NHLPFLQPDKIKDKNKKRPDHPEYDNRTLFIPDEFLNNQTPAMRQWWILKSSHMDTVLFF
KVGKFYELYHMDAVVGVQQLGFSYMKGEFAHSGFPESAYAKMASILIEKGFKVARVEQTE
TPEMMAERCKLQKKTTKYDKVVKREICQISTKATLVYSAQMPDATQPMSCYLYAIAEKKI
QNGVRFGVCFVDTSIGIFHLSEFDDDKHCSRLLALCAEHKPELILVERGCQSSVVSEVFN
TYFKDIRRENLAPNSQFYTAEKTLESLSTGPYFKDKTGQFLWPQLFSELADECIPKSEYV
LTLKCLGACMWYLKDSELDIHVLSMKQFKMYTPKDLENNNKVTQRDYMVLDSVTMDNLNL
LGNQGSLQKNIDHCETPFGKRLLHQWICRPLCDVGKIKERQTAVQELALNADLLKPAQEI
LKKLPDLERQIAKIHIYGNKYCAENHPDGRAIFYESKTYSKRKIQDLLNTLRGFENAQAL
TDIFEGCDSRLLKKITQTGDKGMYLDLTDSLQFFREAFDQEVASKEGVIIPKAGVDEDYD
SAMEKISDIQKSLDKYLKEQEKIFGCKISYFGSDKKRFQLEIPDSHTKKVTGEYQLEGTK
KGNKPCKRYHTEETRSFLAAMLKAEAEKAKIVQDLNRRIFEKFSQRYNEWEQVTHCIMYL
DVLCSLATYCTLSSYSVCLPKIEPFKDKSMVYMTNARHPCITNIENFVPNDISMNCDNKA
GLVLITGPNMGGKSTLMRQVAVIAVMAQMGCYVPAEECTLNLVDRVFTRLGAHDNIIGGQ
STFFVELSEASSILQHASPHSLVLLDELGRGTSTHDGNAIATAYVKKLLQINCRTLFSTH
YHSLVDHFVDRSDVQLGHMACMVENDEDPTQESVVFLYKMVEGRCPKSYGFNAARLAGLK
HSIVARAREIAKVLENQSKGRDIFRKIFSSSDPTILRTLISDLNNLKF
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaacacctaaaagaaagagtcttggaggtcaaagcaatactttattcagttat
tttaaatcaccaaaggtagaaaagaaagatgattctattgtcaaaaaaattgaaaaacca
atttcagaatacaatagtgatgacgaagacattgtgagatgtaaaaaacgaaaaaggatt
ataattcaaagcgattccgaagatgaggccgaattagcaggtaaaaaagccgcaaaaatt
gaaaaaactgctagaaataacagtaaatctgaagacagttctgatgttgaaccagaaagt
agttccggaaatattgattctgagtcgcctgaaaatgaaggcaaagccaataaaggaaaa
aattcttctacaaatggcaacgtcgaattgaagggctctctcgagaagtattcttttgaa
tacaatcaaacggtagacaaaaataaacaaagttgtgaggctcttaatgattcccaaata
gctttgaaaagttcaacaccagctgatgttattgtaagtattcataataattggaaacat
aaccatttaccattccttcaacctgataaaataaaagataaaaacaaaaaacgtcctgac
catcctgaatatgataatcgaactctctttattcctgatgagtttctcaataatcaaact
cctgctatgaggcaatggtggattctaaaaagttctcatatggatacagttctgtttttc
aaagtgggtaaattctatgaactatatcatatggatgcagtagttggtgtccaacaatta
gggttttcatatatgaagggcgagtttgcacattctggttttcctgaaagtgcttacgct
aaaatggctagtatattgatagaaaaaggttttaaggttgcaagagttgaacaaacagaa
acaccagaaatgatggccgaaaggtgtaaattgcaaaaaaaaacaaccaagtatgataaa
gttgtgaagagagaaatttgtcagatatcaactaaagctacactagtttacagcgctcaa
atgcctgatgctacacaaccaatgtcatgttatctgtatgccattgcagagaaaaagatt
cagaatggtgtccgatttggagtatgctttgttgatacttccattggcattttccacctt
tcagagtttgatgatgataaacattgttctagattattagctctttgtgcagaacataaa
ccagaattgattctggttgagagaggatgccagagttctgtagtatctgaagttttcaac
acttacttcaaagatataagaagagaaaatttagcaccaaattctcagttttatacagca
gaaaaaactttggaatctctttcaacaggtccttacttcaaagataaaactggacaattt
ttatggccccaactattttcagagttggctgatgaatgtataccaaaatctgagtatgta
ttgactttgaaatgcttaggagcttgcatgtggtacttaaaagattctgaactggatatt
catgttctttcaatgaaacaattcaaaatgtatacaccaaaagatttggaaaacaataat
aaagtgacacaaagagattatatggttctagattcagtaacaatggataatttaaattta
cttggtaatcaaggatccttacaaaaaaatattgatcactgtgaaacaccatttggtaaa
agattattgcatcaatggatttgtcggccattatgtgatgttggtaaaataaaagaaaga
caaactgcagtgcaggaactagccttgaatgcagacctcttgaagcctgcccaagagatt
ttgaagaaattgcctgatttagagagacaaattgcaaaaattcatatttatggcaataaa
tattgtgctgaaaatcatccagatggtcgagcaatattttatgaatccaaaacctattca
aaaagaaaaattcaagatctcttaaatacactccgaggttttgaaaatgctcaagcatta
actgatatttttgaagggtgtgactctcggttgttgaagaaaattactcaaactggggac
aagggaatgtacttagacttgactgatagcttacaattttttagggaagcatttgatcaa
gaagtagcaagtaaagaaggtgttattatacctaaagcaggtgtggatgaagattatgat
tcagccatggaaaaaatttctgatattcagaaatcattagataagtatttgaaagaacaa
gaaaaaatctttggatgtaaaatttcatattttggttctgataagaaaagatttcaatta
gagatacctgatagtcacacaaaaaaagttacaggagaatatcaattagaaggaacgaag
aaaggtaacaaaccttgtaaaaggtatcatactgaagaaacaaggagttttcttgctgct
atgctaaaagcagaagcagaaaaagcgaaaattgtacaggatttgaatagaagaattttt
gaaaaattctctcaaaggtataatgaatgggagcaagtaacacattgtataatgtatttg
gacgttctttgctctcttgctacttactgtacattatctagttattcagtttgtttaccc
aaaatagaaccattcaaagataaaagtatggtttatatgacaaatgcaagacatccctgt
attacaaatatagagaattttgttcctaacgatatttccatgaattgtgataacaaagct
ggcttggtcttgatcactggacccaatatgggcggtaaatcaacacttatgcgacaagtc
gcagtgatagctgtgatggcccaaatgggttgttatgtacctgcagaagaatgtactttg
aatcttgtggatcgtgttttcaccagactgggtgcacatgacaatatcataggaggacaa
tcaacattcttcgtagagttatcagaagcctcttcaattctacaacatgcttccccacat
tccttagtgttgctagatgagcttggcagaggtacctctactcatgatggaaatgctatc
gcgactgcctatgtaaagaaactgcttcaaatcaattgccgaacacttttctcaactcat
tatcactctcttgtggatcattttgttgataggagtgatgtacaactaggccatatggct
tgtatggtggaaaatgatgaagatccaactcaagaatcggtagtattcctctataaaatg
gttgaagggagatgtccgaaatcatatggattcaatgctgctcggcttgctggtttgaag
cattctatagtagcaagggcaagagagattgcgaaagttcttgaaaatcaaagtaaaggc
cgtgatattttcagaaaaattttctcttcttctgatccaacaattttgagaactttaatt
tctgatttgaataatctgaaattttaa
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