Harmonia axyridis (harlequin ladybird): 123673825
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Entry
123673825 CDS
T10650
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
haxr Harmonia axyridis (harlequin ladybird)
Pathway
haxr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
haxr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123673825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haxr03021
]
123673825
03019 Messenger RNA biogenesis [BR:
haxr03019
]
123673825
Transcription machinery [BR:
haxr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
123673825
Messenger RNA biogenesis [BR:
haxr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
123673825
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_2
Torus
zf-CCCH_3
zf-CCHC
zf-CCCH_4
zf-CCCH_RBM22
zf-CCHC_3
Nab2-like_zf-CCCH_
zf-CCCH_DUS3L
zf-CCCH_9
Motif
Other DBs
NCBI-GeneID:
123673825
NCBI-ProteinID:
XP_045464476
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All DBs
Position
2:complement(64143372..64146253)
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AA seq
288 aa
AA seq
DB search
MELLVADVSHIKFDIEVALQEQFGALALPFAGMDKSTAAVCQFYATTMNCSKGPQCPFRH
VRGDRTIVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHIDPES
KIKDCPWYDRGFCRHGPHCRHRHVRRVLCTNYLTGFCPDGSSCKYMHPRFELPAPPDQNT
KDQKKLPIIICHFCGEHGHKAINCLKINPNNREVAQEESNLIKPPIQNNHQEKFDPQNHF
LQKMFPKKLEDVTCYKCGSKGHYANRCPKGHLAFLSSQTKEKENDPEQ
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggagctcctggttgcggatgtatcacatatcaaattcgatatagaagtagctttacaa
gaacagttcggagctttagctttaccttttgctggaatggataaatcaactgcagcggtt
tgtcagttttatgctacaaccatgaattgctccaagggacctcagtgcccatttcgacac
gttcgtggtgacagaactattgtttgcaaacattggcttcgaggattatgcaaaaaaggg
gatcaatgtgaatttttacatgaatatgatatgaccaaaatgcctgaatgttatttttac
tccaggttcaatgcttgccataataaggaatgcccatttttacacatagatcctgaaagc
aaaatcaaggattgtccatggtacgatagaggattttgccggcatggacctcattgtcga
catcgacacgtgcgaagggtactttgtacgaattatttaactggattttgtcctgatggt
tctagctgtaaatatatgcatcctcgcttcgaattgccagcacctcctgaccaaaacacc
aaagatcagaaaaagttgccaatcataatttgtcatttttgtggagaacatggtcacaaa
gctatcaattgtctaaagattaatcccaataatagagaagttgcacaagaagaatcgaat
ttaatcaaaccccctattcagaacaaccaccaagaaaaattcgatccacagaatcatttc
ttgcagaaaatgtttccaaaaaaattggaagatgttacttgctataaatgtggtagtaag
gggcactatgcaaataggtgtcctaaaggacatttggctttcttatctagtcaaacaaaa
gaaaaagaaaatgatcctgagcaatga
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