Harmonia axyridis (harlequin ladybird): 123674247
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Entry
123674247 CDS
T10650
Name
(RefSeq) collagen alpha-1(XV) chain isoform X1
KO
K06823
collagen type XVIII alpha
Organism
haxr Harmonia axyridis (harlequin ladybird)
Brite
Exosome [BR:
haxr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
123674247
Proteoglycans [BR:
haxr00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
123674247
Glycosaminoglycan binding proteins [BR:
haxr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
123674247
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
123674247
NCBI-ProteinID:
XP_045465138
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Position
2:30034384..30491890
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AA seq
1106 aa
AA seq
DB search
MGRSRLSYHLFVFHFLLCWLTSSTNGGDPFFLPASFILGDSSSAVSEYDLLQAVEIPFPD
QKNQYIDNDGHDRFPAFGFRTGSNVRVAFRQILPERMPTEFAIWISAKMKSRRGGFLFAV
MNPYETVVQLGVKISPEGFTNTVISLFYSNASSINSHAIANFSLPRFHGKWARFAFRVST
DNVTLFFNCNEVQSVSVKREPVGLQFDSASTLYIAQAGPNLSEPFEGALDQLKILVDPNM
ASEQCKTYFKGFQSEEESNDDNEIPVVESTEFGLPSGSGVYPEGSGYEEFPPPPPPPPDG
KNCNYGCENCCNEILSSYNAAGLGYRGEKGDRGPRGPPGESIRGPPGPPGLQGPPGPEGV
CSCNITGILSSYIKENKKYTSFTEIKEGPQGPPGLPGVIGERGPVGPPGPKGDRGEKGST
GIDGQPGTKGEPGRDGLPGVAGPPGPPGPPGPIEFENVDETNVGGGLVRPGVPGTKGEPG
MPGMRGEKGPVGPKGHKGDGGTKGERGDRGLPGDKGPVGPKGDRGNPGLDGLPGTSGKPG
DKGDKGDQGKPGPPGVPGITFNTDDSMGIAPAIPGPKGEPGDKGSRGDKGERGEAGFPGV
PGSIGPVGRVGEKGDRGTDGAMGPVGGPGSKGEKGERGPPGAVIMPDGNEEVITLKGEKG
DPGRRGRRGKPGPPGPPAKSSSSDIWTSKGDKGERGNDGSPGRDGKTGPAGPPGPPGPSS
GGNEDIMRYIPGPPGPPGPPGPPGTSVQGPKGEPGSSFYGETTYNLRPGSRTSLEELRAL
RELKELKDSKSGRATPVPPTSKEDDLPRQIVPGAVSFQDRAAMMKMTSISPVGTIAYIIE
EEAILVRVNNGWQYIALGSLLPVTTPAPPTTNNPHLRPPFEVSNLINNMAKPPDVSNWHP
RMLRMGALNEPYTGDVHGVSGADYACYREARRAGLRGTFRAFLSSRVQNVDSIVRQADRK
LPVSNLRGEILFNSWAEMYNGDGAPFPHAPRIYSFSGKNVLTDLSWPHKVVWHGALLNGE
RALDTSCDAWHSSSKDKVGLAGSLKGPRLLEQTSYSCDKRLILLCIEATTELFVQRKRRD
LDDIRYSYHDDIMSEEEYNKYLQSIH
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgggacgttctagactgagttatcaccttttcgtgttccatttcttgttatgttggttg
acatcatcaacgaatggaggagaccctttttttcttcctgcttcttttatcttaggcgac
agttcttcagctgtttcagaatacgatcttctacaagctgttgaaatccccttcccagac
cagaaaaaccagtatatcgacaatgatggtcacgacagatttccagcgttcggtttcagg
accggcagtaatgtaagggttgcttttcgacagatacttccggagaggatgccaacagag
ttcgctatttggatcagcgcgaagatgaaatccaggagaggaggattcctgttcgctgtt
atgaacccctatgagacggtggtacagcttggcgtcaaaatatcccctgagggattcacg
aacaccgtaatatcgctcttctactcgaatgcctcgtccatcaactctcatgcgatcgcc
aacttcagcctgcccagattccacggcaaatgggccagatttgcattccgggtgtccacg
gataatgtgaccctcttcttcaattgcaacgaagtacaatcggtcagcgtcaagagggag
ccagtgggactgcaattcgactcggcctcgaccctctacatcgcacaggccggcccgaac
ctcagcgaacccttcgagggcgctttggatcaactgaagatattggtcgacccaaatatg
gcttcagagcagtgtaagacatacttcaagggttttcagtcagaagaagagtcgaatgat
gacaatgaaattccagttgtcgaaagtaccgaattcggtttgccctcgggaagcggcgtt
tatcccgaaggcagcggttacgaagaattcccaccaccacctcctccgccaccagatggt
aagaattgtaattatggctgtgagaattgttgcaatgaaattttgtcttcctacaatgca
gccggattaggatatcgaggagagaaaggcgacaggggcccaaggggaccacctggcgaa
tcaatccgaggaccacctggcccacctggacttcaaggaccaccaggacctgagggtgtc
tgctcctgcaatattactggcatcctcagctcttatattaaagaaaataaaaaatacact
agttttaccgaaatcaaagagggaccgcaaggtcctcctggtttaccaggagtcattggg
gagagaggccctgttggtcctcctggtcctaaaggtgatcgtggtgaaaaggggtccacc
gggattgatggccagcctggtaccaaaggggaaccaggcagggatggactccctggtgtt
gcaggaccccctgggcctcctggaccgcctggacctatcgaattcgaaaatgttgatgaa
acaaatgttggaggcggtcttgttagacctggagtaccaggaaccaaaggagaacctggt
atgcctggaatgagaggagaaaagggacccgtaggtcctaaaggtcataaaggcgatggt
ggcactaaaggtgaaagaggggatcgaggacttccaggagacaagggacctgtaggtcca
aagggcgatagaggaaatcctggattggatggtcttcctgggacttcaggtaaacctggt
gataaaggtgacaaaggtgatcaaggcaaacctggtccacctggtgtgcctggaataaca
ttcaatacggacgattcgatgggaattgcacccgctatcccaggtcccaaaggggaacca
ggcgacaaaggatcaagaggtgataaaggggaaagaggagaggctggatttcccggagta
cctggttcaattggtcctgttggaagggtgggagaaaaaggtgatcgaggtactgacggc
gccatgggtcccgttggtggaccaggctcaaaaggtgaaaagggagagcgaggaccgcct
ggtgctgtcattatgcctgatggcaatgaggaagtaattactctgaagggtgaaaaagga
gatccgggcaggaggggaaggagaggaaaacccggacctccgggaccgccagcaaagtca
tcatcgtcggacatttggacaagtaaaggagacaagggcgaaagaggaaatgacggttcc
ccaggcagagatggcaaaactggccctgcaggtcctccaggtcctcctgggccttctagt
gggggtaatgaagacataatgcgttacattccgggtccaccaggaccacctggacctcca
ggaccaccaggaacatcagttcagggtcccaaaggtgaaccaggatcttcattctatggc
gagacaacttacaatctaagacccggatcaaggactagcttggaagagctcagggctcta
cgggagttgaaggaattgaaggattcgaagtcaggtcgagcgacacccgttcctcccacc
tcaaaggaagatgatctacccaggcaaattgtgcccggagctgtgtcattccaagacagg
gctgccatgatgaaaatgacttccatcagtcccgtgggaacgatagcgtatattatagag
gaagaagcgatattagtaagggtcaataatggttggcaatacattgcgctgggatctcta
ttacctgtgaccacccccgcaccgccaactacaaataacccgcatctgcggccgcctttt
gaagttagcaaccttataaataacatggccaaacctcccgatgtttccaattggcatcca
agaatgttacgtatgggtgctctcaatgaaccctacacaggagacgtccatggagtcagt
ggtgcagactacgcttgttaccgtgaggcacgaagagcaggtttgagaggaaccttcaga
gcctttttatcctcgagggtacaaaatgttgactccatcgtgagacaagcagacagaaaa
ttacctgtgtccaacctccgaggtgagattcttttcaattcctgggccgaaatgtataat
ggagatggtgctccttttccccacgcccccagaatatattccttcagcggcaagaacgtt
ctcacagatttatcttggccacataaagttgtatggcatggcgcactgctgaatggagaa
agggccttagacacttcctgcgatgcttggcattcgtcctcgaaagataaggtcggcctg
gcaggatccctgaaaggccccaggttactcgaacaaacttcctactcgtgtgacaagcgt
ctgattctgctgtgtatcgaggcaacaaccgagctcttcgttcagaggaagcgaagagat
ctagatgatatcaggtactcatatcacgatgatatcatgagtgaagaagaatacaataag
tatctgcagtccattcattga
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