KEGG   Harmonia axyridis (harlequin ladybird): 123674256
Entry
123674256         CDS       T10650                                 
Name
(RefSeq) roquin-1
  KO
K15690  RING finger and CCCH-type zinc finger domain-containing protein
Organism
haxr  Harmonia axyridis (harlequin ladybird)
Brite
KEGG Orthology (KO) [BR:haxr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:haxr03000]
    123674256
   04121 Ubiquitin system [BR:haxr04121]
    123674256
Transcription factors [BR:haxr03000]
 Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    123674256
Ubiquitin system [BR:haxr04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    123674256
SSDB
Motif
Pfam: Roquin_1_2-like_ROQ ROQ_II zf-RING_UBOX zf-RING_5 zf-CCCH zf-C3HC4_4 zf-C3HC4 zf-RING_2 PaaA_PaaC Vesi_VP2 zf_CCCH_4 COG6_N Prok-RING_4 zf-RING_6 Sina_RING
Other DBs
NCBI-GeneID: 123674256
NCBI-ProteinID: XP_045465172
LinkDB
Position
2:5873804..5883718
AA seq 890 aa
MPIQAPQWTEFLSCPVCCHTFDGALRSPISLGCGHTICKACLSNLHRKQCPFEQNVISID
IENLPINTALLQLIIPLNKSEHDETTVDFKIIPREFTSLYLISKQCVEKLALYLKPFPNG
SVSGGGSILSRPMQRKLVTLINCQLVEDEGRTRAMRAARSLGERTVTELILQHQNPQQLS
NNLWAAVRARGCQFLGPAMQEEVLKLVLLALEDGSALSRKVLVMFVVQRLEPHFPQASKT
SIGHVVQLLYRASCFKVSKREGDSSLMQLKEEFRTYEALRREHDAQIVQIATEAGLRIAP
DQWSALLYGDTAHKSHMQSIIDKLQTPQSFAQSVQELLIALQRTGDPGKLSALRPHLELL
AAIDPSAESAIPSWKEFSEALEAVQQVVAGLVEFIHQYGNRKLQDTTHSQHAKYKISMCR
DLTLRGSCPRSTNCTFAHSNEELEKYRAKNRKTMIRNKEHRIDSQSPSDKSYNQPEEYYT
PIPNTAAPSPVSMPTMVPGMVQGMSYDVPPYIKYPRNTPHHSSPQQMFPNGLSPFSPHEM
YGSNQSNVMVSNNGQNYFSSPEFSDLNHPNLPSEAPRSTNWDMAKNQNMPVQPKLPRGQG
KSLAELYQRKQEVISLLEKVVGKNAATAISNDATTLARQESQIDMDSPSSPYSFLPPHMN
TGPTFVRSDSILTPDDDYVPYDSPSINKYGPISRMHKDNNLSQSTSFRDSSLPSNLTHRP
MSSGSPLASLYYNNNPQIYPPNIPQGAYVSSGNVISPQFLHMHPRMQDHSKEIMAESQRV
SLQLRSLEKQLKDLNKLAAQKMPNLSESDKLTQELQLIEQGIHEKQKEACLNHIVNSWNL
TMNANINPGPSEDNMYEDDIANDMKELELRWKEELEEQEKRWSSEDDSNK
NT seq 2673 nt   +upstreamnt  +downstreamnt
atgcccatacaggcaccacagtggacggaatttctgtcttgtccagtatgttgccacaca
tttgatggagctttgaggagccccataagtttaggttgcggacatacaatatgcaaagct
tgtctatcaaatttgcacagaaaacagtgtccttttgaacaaaatgttataagtatagac
atcgaaaatttaccaatcaacacagccttacttcaacttattatacctttaaataaaagt
gaacatgatgaaacaacagttgacttcaaaattataccaagagagtttacaagtttatat
ctcatatccaagcaatgtgtggaaaagttggctctctatctcaagccatttcccaatgga
agtgtatctgggggtggtagtatactttcaaggcctatgcaaagaaaattggttacgttg
ataaactgtcaacttgtcgaggatgaaggaagaactagagctatgcgtgctgctagatct
ttgggggaaaggacagttacagaattgattttacaacatcaaaaccctcaacagctgtcc
aacaacctttgggctgctgttagagccagaggttgtcaatttttgggtccagccatgcaa
gaggaggtattgaagctagtacttctagctttagaagacggatcagcattatcgcgaaaa
gttcttgtgatgtttgttgttcagaggttagaaccacattttccccaagcttcaaaaacg
agtatcggacatgttgtacaattattgtatagagcttcatgcttcaaggtttcgaaaaga
gaaggcgactcttccctcatgcagctgaaagaagaattcagaacgtacgaggccttgcgt
agggagcacgatgctcagattgtacaaattgcaacggaggcgggtcttagaattgcacct
gatcaatggtctgcattgttgtatggcgataccgctcacaagtcgcacatgcagagcatc
attgataagttgcaaacgcctcagtcctttgcgcagagcgtacaagagcttctgatcgct
ctgcaaagaactggcgatccggggaagttgtccgctttgagaccacatctggaactactg
gctgccatagatcctagtgcagaatcggccataccatcttggaaagagttcagcgaagcc
ctggaagcagtgcaacaagttgtcgctggtctggtggagttcatccaccaatatggcaac
cggaaacttcaggatacgacacattctcagcatgccaaatacaaaatcagcatgtgtcgt
gatctgacacttcgcggtagttgtcccaggagtaccaattgtacatttgcccactcaaat
gaagagcttgagaaatacagggccaaaaatcgcaaaacgatgatcaggaacaaggagcac
aggatagacagtcagagtccttcggataagagttataatcagccagaggagtattacaca
cctatacctaacactgctgctcctagtcctgtttctatgccaactatggtaccgggcatg
gtccaaggaatgagttatgacgttcctccttacatcaaatatccaagaaatacaccgcac
cattcttccccacaacaaatgtttcccaatggtttgagccccttttcgccgcatgaaatg
tacggttccaatcagtcgaatgtgatggtgtcaaataatggtcagaattacttttcatct
ccggaattctccgatttaaatcatcccaacttaccttctgaggctccgaggtccaccaac
tgggatatggcaaagaaccaaaacatgccggtccaacctaaattgcctcgtggacaggga
aaaagccttgctgaactgtatcagcgaaagcaagaggtaatttcgcttctggagaaagta
gtagggaagaatgctgctacagcaatatctaatgatgcaacaactctagcgcggcaagag
tctcaaattgacatggacagtccctcgtcaccttatagctttttaccaccacatatgaat
acggggccgacgtttgtgagatcggattcaattttaacgccagatgatgattacgtccca
tacgattctccttctatcaacaagtacggtcccatttctaggatgcacaaggataacaat
ttgagtcagtctacctcgtttcgagattccagtttaccgtctaatttgactcataggcca
atgtcttcaggaagtccactagcttcactgtattataacaataatcctcaaatatatcct
ccaaatataccacaaggagcttacgtttcatcaggaaatgtgataagtccccaatttttg
catatgcatccgaggatgcaagatcattccaaggaaataatggctgaatctcagcgggtt
agtttgcagttgcgaagtttagagaagcaactgaaagatttgaacaagttagcagcacag
aaaatgcccaatctgagcgaaagcgacaagctcacacaagagttgcaactgatagaacaa
ggaatacacgaaaaacaaaaggaggcatgtctgaaccacatagtcaattcttggaacttg
actatgaacgccaatataaaccctgggccatcggaagataacatgtatgaagacgacata
gccaacgatatgaaggagctcgagcttcgttggaaggaggaactggaagaacaagaaaag
aggtggagcagtgaggatgactctaacaagtaa

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