Harmonia axyridis (harlequin ladybird): 123676049
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Entry
123676049 CDS
T10650
Name
(RefSeq) DNA mismatch repair protein Msh2 isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
haxr Harmonia axyridis (harlequin ladybird)
Pathway
haxr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
haxr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
123676049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haxr03400
]
123676049
DNA repair and recombination proteins [BR:
haxr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
123676049
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
AAA_27
SpoIVA_middle
AAA_29
AAA_14
Motif
Other DBs
NCBI-GeneID:
123676049
NCBI-ProteinID:
XP_045467663
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Position
3:7240470..7253789
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AA seq
919 aa
AA seq
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MTTTEPTNALNLDLSQQLSFIRFFNNLPEKSSTTIRFFNRTDFYTVHGNDALVVSQINGS
TVKYMGEEPKLRYVTLSKSQFELVLRELLLVRQYRVEVYLKQTQGRNNDWQVEYKGSPGN
LSQFEEILFENADIVYSNSVMGIKIVKNRVLALGCVNVAESKFNVCEIVDNDCFTELEAL
IAQISPKECIIPDTENNDYTSLKNLLERNGVLVARVKKSDFNSSEVMEDLNRLLYFQKGQ
TRNALTFSETQLNEAMGSLQALIKFLNLPGDERNFNQYKFETLDMSRFVRLDNAALQALN
VFPQAGTSTVEDSVLVPNSSKSSSLMGVLNFCSTNQGKRLLSQWIKQPLRDYNLINDRLN
VVDCFIKNMETRVSLTKDCLPRLPDTLLLVKKLSSKKASLQDCYRIYQTISGVPHLLKNL
RETGNKHVKSMLIDPISEILFDLQKYLEMIEQVLDLDLVDRGEFLVKHTFDDQLKDLYRE
KQKYEEKMQKLLRRAIDDLGLEDGRVKLECTDQHGYFFRVTLKEEHVLRGNKQYSIIDAI
KGGVRFTNDKLSEINEDYRGLKENYEQVQKAVVEQILDIAAGYSETLRNLNILIATVDVL
TSFSVAAVSAKIPYVRPKLHETNSGILSLKKVRHPCLEHQDHISFIPNSATFDKENNTLH
IITGPNMCGKSTFIRSVGVCVLMAHIGCYVPCESAEISVVDSILARVGADDCQLKGLSTF
MLEMIETSTIVKTATSNSLVIIDELGRGTSTYDGCGIASAIVEYLANEVKCFSLFATHFH
EIISLAEKFSNVTNWHVTAATTNNTITPLYQVRQGPCDKSYGIHCARMVGFPEDVLQWAE
EYQKELEHFEGTKLIADYEDSLKREVIESGDKIIQQTLKDVVALSVNSLSDENLCQRLKN
IKEEILKEDNKFLKGLLCE
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgacaactacagagccaacgaacgcattgaatttagatttgtcacaacaattgagtttc
ataaggttcttcaataacttgccagagaaatcatcgacaacgataagattcttcaataga
accgatttctacacagttcacggaaatgatgctctggttgtatctcaaatcaacggaagc
actgtcaagtatatgggagaagaacccaagttacgatatgttaccctcagcaagtctcag
ttcgaattggtactcagagaactgttgctggtgagacagtacagggttgaggtttacctg
aaacagacccaaggaagaaataatgactggcaagtggaatacaagggttctccaggcaac
ctttctcaattcgaggaaatcttgtttgagaatgctgacatagtctattcaaactctgtt
atgggtattaaaatagtaaagaatagagttctggcacttggctgtgtgaatgtagccgag
tccaagttcaacgtttgtgaaattgttgacaacgactgtttcaccgaacttgaagccttg
atagctcaaatcagtccgaaagaatgcattatacctgatacagaaaacaatgattacacc
tccctcaaaaatctgctagaacgaaatggggttttggtagccagggttaagaaatcagat
ttcaactcttccgaagtgatggaagatctcaatagacttctctacttccaaaagggacaa
accagaaacgctttgaccttttctgaaacgcagttgaatgaagctatgggatcccttcaa
gctctgataaaattcctgaatttacctggtgacgaaagaaattttaatcagtacaaattt
gaaactctggacatgtcacgatttgtgagactggataatgctgcgttgcaagctctgaat
gtttttccccaggctggtactagcactgtagaagattctgttttagttcctaattcatcg
aaatcttctagtttgatgggagtgttgaatttttgttctactaatcaaggaaaaaggctt
ctatctcaatggatcaaacaacctcttcgagactacaacttgataaatgataggttgaac
gttgtagattgtttcataaaaaatatggagaccagagtttcgttaaccaaggattgtctt
cctcgtctacctgacactttgttgcttgtgaagaagctgtcttctaagaaagctagctta
caagattgctatagaatttaccaaactatatctggagttccccatttgttgaagaatttg
agggaaacgggaaataaacatgtgaaatctatgcttatagatcccatatccgaaatacta
tttgatcttcagaaatatcttgagatgatagaacaagtgcttgacttagacttggttgac
cgtggggaattcttagtgaagcatacatttgatgatcaacttaaagacttgtatagagag
aaacagaaatatgaagaaaagatgcaaaaacttttgagacgggcaatcgatgacttagga
ttggaagatggaagggtcaaattggaatgcacagatcaacatggttacttcttcagggtg
acattgaaggaagaacatgttttgagaggaaataaacaatatagcattatagacgcgatt
aaaggaggggtgagattcactaatgataaattatctgagataaacgaagattatcgaggt
ttgaaagaaaactatgagcaagtacaaaaagctgtagtcgaacaaatacttgatatagca
gctggatattccgaaactctacgaaatttgaacatcttaatagctacagtagatgtgttg
acttctttttcggtagcagcagtctctgccaaaataccttacgtaagaccaaagctccat
gagaccaattcaggtattctatcgttgaaaaaagtgcgtcatccatgtctggaacatcaa
gatcatatatcttttatcccaaatagtgcgacattcgacaaggaaaacaatactcttcat
atcattactggtccaaatatgtgtggtaaaagcaccttcatcagaagtgtgggggtatgt
gtgttgatggcccatattgggtgctatgtgccttgtgagagtgcagaaattagcgtagtt
gatagtattcttgctagagtgggggctgatgattgtcagttgaaggggctatctacgttt
atgttagaaatgattgaaacttcgactattgtgaaaacagctacatctaattcattagta
ataatagacgaattgggaagaggaacatcaacatacgatggttgtggaatcgcttcagcc
attgttgagtatctagccaatgaagtgaagtgcttttccctctttgctacgcatttccac
gaaataatcagtttggcggaaaagttttcgaatgtaacaaattggcatgtgactgctgca
acaactaataataccattacgccattatatcaagttaggcaaggaccttgcgataaaagt
tatggaattcactgcgctcgcatggtcgggttccctgaagatgtcttgcagtgggctgaa
gaatatcaaaaagaacttgaacatttcgaaggaacgaaattgatagcagattatgaggat
tccctaaaacgagaagtaatagagagtggagataaaataattcagcaaactctgaaagac
gttgttgctctatctgtaaacagtttgtcggatgagaatttatgtcagagattgaagaat
atcaaagaagagattcttaaagaagataataagtttttgaaaggattattatgcgaatag
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