Harmonia axyridis (harlequin ladybird): 123676404
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Entry
123676404 CDS
T10650
Name
(RefSeq) exosome complex component CSL4-like
KO
K07573
exosome complex component CSL4
Organism
haxr Harmonia axyridis (harlequin ladybird)
Pathway
haxr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
haxr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123676404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haxr03019
]
123676404
Messenger RNA biogenesis [BR:
haxr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
123676404
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
123676404
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GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
123676404
NCBI-ProteinID:
XP_045468240
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Position
3:35927618..35928433
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AA seq
204 aa
AA seq
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MAEKKICVPGQRLSVKDETYVSGNGTFERVGYIYSNLAGVVDIIKKNNIKIIEVVNPNVQ
TIVPAHGDIVTAEVTIITQQYVKCLIKCIGHKILKRHFKGVVRREDIRATEKDRIEVFKC
FRPGDIILARVMPITEAHTYQLSTAENELGVAIAHSEHGHPMIPISWNEMQCTKSYVKEA
RKVAKIIPEKIPNDIVGHLTEYLY
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaaaaaagatttgcgttccaggacaaagattaagtgtaaaagacgaaacttat
gttagtggaaatggtactttcgaaagagttgggtatatttactcaaatttagccggtgtt
gttgatatcattaaaaaaaataatattaaaattatagaagttgtaaatcctaacgtgcaa
accatagtaccagcgcatggtgacattgtgactgcagaagttactatcataactcagcaa
tatgtaaagtgtctcatcaaatgtattggacacaaaatattaaaaaggcatttcaagggt
gtcgttaggagagaggatattcgtgcaaccgaaaaagatagaattgaggtattcaagtgt
tttaggcctggtgatattatattagccagagtgatgccaattaccgaagctcatacatat
caactttcaacagcagaaaatgaattgggggtagcaattgctcattccgaacatggacat
cccatgatacccatcagttggaatgagatgcagtgtacaaaaagttacgtaaaggaagca
cgaaaagtagcaaaaatcattcctgagaaaattcctaatgatatagttggtcacttgaca
gaatatttgtactaa
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