Harmonia axyridis (harlequin ladybird): 123677473
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Entry
123677473 CDS
T10650
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
haxr Harmonia axyridis (harlequin ladybird)
Pathway
haxr04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
haxr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
123677473
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
haxr01009
]
123677473
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
haxr04131
]
123677473
03029 Mitochondrial biogenesis [BR:
haxr03029
]
123677473
Protein phosphatases and associated proteins [BR:
haxr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
123677473
Membrane trafficking [BR:
haxr04131
]
Autophagy
Autophagosome formation proteins
ULK complex
123677473
Mitochondrial biogenesis [BR:
haxr03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
123677473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG17_like
ATG11
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
123677473
NCBI-ProteinID:
XP_045469961
LinkDB
All DBs
Position
4:38396017..38417022
Genome browser
AA seq
1249 aa
AA seq
DB search
MGNSHPLVKPPRTVQSWKPKALTQLEITQNYLKQFKVEKRTDPAMLYLFDITKFPSNWMH
LEMGLTAVSVQTLKEYIQTKFKINAEDQVLLISGGVCLEDSRIVCNYSAGTDSNPIFFFN
KKIDKNDSFPECPDVSTTTDDLNTRYKKLARVTPSFQAVIDRAGLADRFAQSAVMIIEHC
EEIIRDHHTANQGWLAAVANYEDVVANCHRHNEESRENLDRYLGERDYFLNFLEKFKEKL
PVFKKIPMLQKLLRPTDCENRLMIGSQTSEGLGDKECDETSTSFYDWVGEDEQGNGIDGI
YKNCEQEVQTYKEDYFKYAFECVEHTLSVAESSNKEINVSFWLSHLDQLIHKAGKIVEEQ
KKISSSIQLNVARMKDCKDVSILPHLCETHAQELQVMNENHSILKDIENTCTKAKYEFTH
NVQGRIGWIVNIENELQQIGIQLDIFNETVERLRFQISILEKIYMAPTAYFACIAETVRR
RSFSQAFIMWASEMACRLHTLHNEEVSRRKEFISKYEDTFVKMLFPGLEDLPPSYGTKAP
SYFDTSLPKLTVEDIDLLKQQLPDLPKELTECLSLEDSSDLSYYLSYKSILNIQSDKLEE
EIQSEDPADKVQVENQNENIGKSFIKEGVGECSLTAIHGLPHLKDVDRGCESETDTEEFE
KVSRSPLELNFNKDAPSQRPSTQDVSTSTEDNLEVSKSEYNSLRSSISQACSSASQSLNQ
VKSELKEFKRDYNLSKIELIELLKTLTSGYEKLCNEQQSHEQSVVLRLSTDHKNEISDFR
RLAQVKNEEIKCLRSEMVFLENKLRKVSEENTLEKQNSDDYKQKYEEMKVQVAFLENEKD
RSIKELTERLNREHADKMKTLQSRFKLMTMERTQSESSLSLEKTMEFSTSLNHESIYIQM
KDNFELEKEKYMKETLKLETEKWEKTLDKLKEEYENEKKQLKEHYHEEMEKKEKSFLEDQ
QKHMDKINELSAIIELKQQNEKINKLDQSEIAEGLENETVVSTSELLKNKTEMVAMVGSY
SEGKVDSATSPIKQRRSVFKAVNVLGKSSKPNVDALKPGDCLVIVWDEEYQNFRVVQNGP
VIYFLHLDCLQSLGLEIYDGSPKRPNKLYCLGEYVEKEYCYARKSENRFNVPQGTRFFRI
TVKPLQQGKTSQSPPVMESSDCSLSQQASISIAEMELAPLPPLPKWKYTPKELPPETFGV
VRDSMSEVNEFSDNKSEDSSKSLAFQTASYDFDQQEPEVTGDDLSEPLW
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atgggaaactctcatccgttagtgaaacctccaagaacagtgcaatcatggaaaccaaaa
gcattaacccagcttgagataacccaaaattatttgaagcaatttaaggtagagaaaaga
actgatccagccatgttgtaccttttcgatataactaaattcccctcaaattggatgcat
cttgaaatgggtttgaccgcagtaagtgttcaaacccttaaagaatatatacaaacaaaa
tttaaaatcaatgccgaggatcaagttcttctgataagtggaggggtatgtttagaggat
tcaagaatagtctgtaactatagtgcaggaacggattcaaatcctatattcttcttcaat
aagaaaattgataaaaatgatagttttcctgaatgcccggatgttagcactacaacagat
gatctgaacacaaggtacaaaaaattagctagggttacgccatcattccaagctgtgatt
gatagagctggcttagcagatagatttgcccagtctgcagtaatgattattgaacattgt
gaagaaatcataagggatcaccatacagcaaatcaaggctggttagcagctgtagcgaat
tatgaggatgtagttgcaaattgccatagacacaatgaggagtcaagagaaaatttagat
agatatttgggggagagagattattttttgaatttcctggagaaatttaaagaaaaattg
ccagttttcaaaaagatcccaatgttacaaaaattattgagaccaacagattgtgagaat
agattaatgattggctcacaaacttctgaaggattaggtgataaagaatgtgacgaaact
tctacttccttttatgactgggtcggcgaagatgaacaagggaacggtattgatggcata
tataaaaattgcgagcaggaagttcaaacttataaagaggactatttcaagtacgccttc
gaatgtgtagaacatactttatcagtagcagagtcttcaaataaggaaataaatgttagc
ttctggttaagtcacctagaccaattgatccacaaagcaggaaagattgttgaagaacag
aagaaaatttcttcttctattcagttgaatgttgcaagaatgaaagactgtaaggatgtg
tcgatcttgccccatctatgtgagactcatgcacaagaactacaagtaatgaatgagaat
catagtattttgaaagatattgaaaacacatgcaccaaagcaaagtatgaattcacccac
aatgttcaaggtcgtataggttggattgtaaatattgaaaatgagttgcaacagattgga
attcaacttgatattttcaatgaaaccgtcgagaggcttagatttcaaatttctatttta
gagaaaatttacatggcacctacagcttattttgcttgtatagcagaaactgttagaaga
aggagtttctctcaagcattcataatgtgggcttcagaaatggcatgccgtcttcacaca
ttgcacaatgaggaagtatctaggaggaaagaattcattagtaaatatgaagatactttc
gtcaaaatgctgtttcccggtttggaagatcttccgccaagctatgggacaaaggcccct
tcctacttcgatacaagtcttccgaaactcacggttgaagatatcgatttattgaaacag
cagttaccagacttaccaaaagagttgacagaatgcctgagtttagaagattcttctgat
ttatcatattatctatcgtacaaatcgattttgaatattcaatctgataaattagaagag
gaaattcaatctgaagatcctgcagataaggttcaggttgaaaaccaaaatgaaaatatt
ggaaagagttttatcaaggagggagttggagaatgcagtttgactgcaatacacggtctt
cctcatttgaaggatgtggacagaggctgcgaatcggaaactgatactgaagaatttgaa
aaagtcagccgaagtccattggaattgaatttcaataaagatgctccatctcaaaggcct
agtacccaagacgtatctacctcaacagaggataatttggaagttagtaagagtgaatat
aacagtctgagatcctcaatcagtcaagcatgttcttcagcttcacaatcactcaatcaa
gtaaagtcagaattgaaagaattcaaacgggattataatctcagtaaaattgaacttatc
gaattgcttaaaacactaacaagtgggtacgaaaaattatgtaatgaacaacaaagtcat
gaacaatctgttgttctcagattatcaacagatcataaaaatgaaattagcgatttcaga
agattagctcaggtaaaaaatgaagagatcaaatgtcttagaagtgaaatggtattcctt
gaaaataaattgagaaaggttagtgaagaaaacacattggagaaacaaaattcagacgat
tataaacagaagtatgaagaaatgaaagtacaagtagcttttctagagaatgaaaaggac
aggagtatcaaagaattgactgaaagattgaatagagaacatgctgataaaatgaagaca
ttacaatctcggttcaaattaatgacaatggagagaactcaatcagaaagcagtttgagt
ttggaaaaaactatggaatttagcacttctctaaatcacgaatccatttacattcaaatg
aaagataactttgaattggaaaaagaaaaatatatgaaggaaactctcaagttagaaact
gaaaaatgggaaaaaaccttggataaactgaaggaagagtacgaaaatgaaaagaaacag
ttgaaggaacattatcatgaggaaatggagaaaaaagaaaaaagtttcttagaggaccaa
caaaaacatatggataaaataaatgaattaagtgctattattgagttaaaacagcagaat
gaaaaaataaacaaattagaccaaagtgaaattgctgagggcttggaaaatgagacagtt
gtttctacttcagaactcctgaaaaataagactgaaatggtagctatggtaggatcatat
tcggaaggtaaggttgattctgctacaagtccaataaaacaacgtagaagtgttttcaaa
gcagtgaatgttttgggaaaatctagtaagcctaatgtggatgcattgaaacctggtgac
tgtttggtcattgtttgggatgaggaataccaaaactttcgagttgttcagaatggtcca
gtcatatattttcttcaccttgattgcttgcagtctctaggtcttgaaatatatgatggc
tcaccgaaaagacctaataaattgtattgtttgggagaatatgtggagaaggagtattgt
tatgctcgtaaatctgagaatcggttcaatgttccccaaggtaccagattctttcgaata
acggttaaacccttacaacaaggaaaaacaagtcaatctcctcctgttatggaatcatct
gattgttcattatctcaacaagcatcaatttccatcgctgagatggaacttgcacctctg
cctccattacctaaatggaaatacactccaaaggaattaccacccgaaacttttggtgta
gttcgagacagtatgtctgaagttaatgaatttagtgacaataaatctgaagactcaagt
aaaagtttggcatttcaaacagctagttatgactttgatcagcaagaaccagaagttact
ggtgatgatttaagtgagccactttggtag
DBGET
integrated database retrieval system
