Harmonia axyridis (harlequin ladybird): 123677921
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Entry
123677921 CDS
T10650
Name
(RefSeq) endoribonuclease Dcr-1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
haxr Harmonia axyridis (harlequin ladybird)
Brite
KEGG Orthology (KO) [BR:
haxr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
haxr03036
]
123677921
Chromosome and associated proteins [BR:
haxr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
123677921
microRNA pathway
RISC loading complex
123677921
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Dicer_platform
Dicer_dsRBD
Ribonucleas_3_3
Dicer_dimer
PAZ
Helicase_C
Dicer_PBD
DEAD
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
123677921
NCBI-ProteinID:
XP_045470620
LinkDB
All DBs
Position
1:complement(15155779..15161809)
Genome browser
AA seq
1815 aa
AA seq
DB search
MSHFSNENFYSHTFTPREYQVELLESAKKRNTVVCSSTGSAKTFVIIKLLQEFSWRMRNS
LKKTLFLLDDCNVPIIGTQIKLITDLKVVTLVANNIDEEKWNNALCVNEIVLVNENICQK
LIQFNLIDLSKFELLIIDDCLYGDRQRLIHELMECYKITEEKPRILGFSASLLGLDLKPE
YLESELLRLEKLLNSKVDTSSEIVTLIRLSCRPKEYVVECALSPTDDLNNSIRKEVFDAL
NFLKEHRFDPSEIYEADLLEEMKQAPNPVDEPINLLNKILSILADMGAWCAQQAALGMLA
KIEKLKIKVPYERHFLLLCMVSTVLVKIHAICDDYMENLSDTERVLNFSTPKILRYLEIL
KKFKPNIEKSNVQDIVPEQGKDNEVNVRFRRGGRVPRRLFIQKNQTEDSICCLTFVGDCY
RARALFNLLCVMSQNHDDFFWVSTQYAAEKTADPAKELKEAELEHKQHEEVLRKYRAHEV
NIMISTSILEQGCDLPKCNLVIRFDLPQMFHSYIQSKARARASYAHFISLVNEDNTMEYI
KKLSQYNEIENILLQRCCSLEPEKEEEYYADCFSALCKPYQPLNEEGAPFVTLSNAVTLI
NKYCAKLPSDTFTKLTPIWDEEKIQDGYICHIRLPINSPVKKTIISPPMFNSLLARRAAA
FMACQLLHKTGELDNNLQPIGKENFVATEDDWNIFPLDEADEQLARENLEPRPGTTKRRQ
YYYKKVADALLGCHPIAGQPSYFYKIVMTLTCPLPEEQNTRGRKIYPPEDFPQSFGILTS
KKIPKISSFPIFTRSGEVSVDLELCSSNIILSLEQISQLREFLNYTFTRVLRLQKYLMLF
NPDASLNSYLVVPTTSYLPNKTVIDWKFVELINENLTILPEIVPEENRKNYKFDPDKYED
AVVMPWYRNQDQPQYFYVAEICKNLSPKSSFPGSEYATFEEYYLKKYDIQIQNFSQHLLD
VDHTSARLNFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQILVPELCAIHPFPASLWR
KAVCLPCILYRINALLLADQIRKTVAVELLLGKAELEENFKWPALSFGWSLCDVIKKTKE
EEINMETELPSEIMESKISDRIESMECNEFDLEIAQITDSVDSNSDEEKSSWAIGTWSND
MAGFDQEGTEFAIKYSSPTSWMISDDYDDYSCSESFYSDDDSNDDIGGCRIEFTGNYLAE
AVESEEIKEEIVAIKQYNSVWSDINCNIGNVEELQQKFDEACDQNMKKILKSGMLLRKDQ
VFVKSDEIQNTPKIYENISVSDFDFNQLDVTPCKLLCSPKKFQKTVYNCDIENNTFKFDA
QPPLENHPGPSPNLLLQALTMSNANDGINLERLETIGDSFLKYAITNYLYSKYENIHEGK
LSHLRSKQVSNLNLYRLGKRKNLGEFMIATKFDPHDNWLPPCFYVPKELEEALLAAQYPA
NCWTMADMEATRDMTLEDICSMVKEKGEEMAFPNSIPYNLVTQHSIPDKSIADCVEALIG
AYLIDCGPRGALLFMSWLGIKVLPVINDKTYGEFELPHSPLLRHVPNSEKELETLLNGYN
ELEDHIGYKFKDRSYLLQALTHASYSPNRITDCYQRLEFLGDAVLDYLITRHLYEDSRMH
SPGALTDLRSALVNNTIFASLAVRNGFHKYFRHLSPGLNEVIEKFIRLQEECGHSIVEEL
YLVIETDAEEVEDVEVPKALGDIFESVAGAIFLDSEMSLDAVWAVYYKMMKVEIEQFSNK
VPKSPIRELLELEPETAKFGKPEKLADGRRVRVSVEVFGKGTFKGIGRNYRIAKCTAAKC
ALKHLKRQGLIRRNE
NT seq
5448 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcatttttctaatgagaatttttattctcatactttcacaccaagagaatatcag
gttgaattattagaatcagcaaaaaaaaggaatactgttgtttgttcaagcactggttca
gcaaaaacatttgttattataaaactacttcaagaattttcatggagaatgagaaattca
ctgaaaaaaactctttttttattggatgattgtaatgtacctattattggaacacaaatc
aaattaatcactgatttgaaagtcgtcacattagttgcaaataatatagatgaagaaaaa
tggaataatgctttgtgtgtcaatgaaattgttctagtgaatgaaaatatttgtcaaaag
ttaatacaattcaatttaatagatttgagtaaatttgaattgttgatcatagatgattgt
ctttatggagatcgccaaaggttgatacatgaattgatggaatgttataagataacagag
gagaagcctaggattttgggattttctgctagtttgttaggtttagatttaaaaccagaa
taccttgaaagtgaattattaagattggaaaaattgttgaattcgaaagttgatacatca
agtgaaattgtaaccctcattaggttatcatgtcgacctaaagaatatgttgttgaatgt
gctcttagtcccactgatgatttaaataattcaattagaaaagaagtatttgatgcactg
aattttctcaaggaacataggtttgatccgagtgaaatatatgaagcagatttactagaa
gagatgaaacaagcaccaaatcctgtagatgaaccaatcaatttattgaataagatatta
tcaattcttgctgatatgggtgcttggtgtgcacaacaagcagcattaggaatgttagct
aaaatagaaaagctcaaaataaaagttccttatgaaaggcactttcttttattatgtatg
gtttcaacagttttagtgaaaattcatgcaatttgtgatgattatatggaaaacttatca
gataccgaaagagtcctgaatttctcaacacctaaaatattgagatatttggagatattg
aaaaaattcaagccaaacattgaaaaatcaaatgttcaagatattgttccagaacagggt
aaggacaatgaagttaacgtaagatttagaagaggtggtcgagtgccaagacgattattc
attcagaagaatcaaacggaagattctatctgttgcttgacttttgttggtgattgttat
agagccagagctttatttaatttgttgtgtgttatgtctcagaatcatgatgattttttt
tgggtgtcgacacaatatgctgcagaaaagactgcagatccagctaaagaattgaaagaa
gcagaattagaacacaagcagcatgaggaagttctgagaaagtatcgtgctcatgaggtt
aatataatgatatcaacttctatactagaacaaggctgtgatttaccaaaatgtaattta
gtcataagatttgatttgccgcaaatgtttcacagttatatacagagtaaagctagagca
agagcatcttatgcacatttcatatctctagtaaatgaagacaacaccatggaatatatc
aaaaaattatctcaatataatgaaattgaaaatattcttcttcaacgatgttgcagttta
gaaccagaaaaagaagaggaatattatgcagactgtttttcagctctatgtaaaccatat
caaccactgaatgaggaaggtgcaccattcgtaacactttccaatgctgtgaccctgatt
aataagtattgtgctaagttgcccagtgatacattcacgaaattaactcccatttgggat
gaggaaaaaattcaagatggttatatttgtcatataagactaccaataaactctccagtt
aagaaaacaatcatcagcccaccaatgtttaacagtttattagctagaagagcagcagct
ttcatggcatgtcagttactacataaaaccggggagttagacaataatcttcaacctata
ggaaaagaaaactttgttgcaactgaagatgattggaacatatttccattagatgaagct
gatgagcagcttgcccgagaaaatttggagcctagaccgggaaccacaaaaagaaggcaa
tattactacaaaaaagttgcagatgcactgttggggtgccatccaatagcaggtcaaccc
agttatttttataaaattgtaatgacattgacttgccctttgccagaggaacaaaacaca
cgaggtagaaagatatatcctcctgaagattttccacaaagttttggtatcttaacatct
aaaaaaattccaaagataagttcttttcccatatttacaagatctggagaagtaagtgta
gatttagaattatgttcaagtaacatcattttatcattggaacaaatctcacaactgaga
gaatttctgaactatacattcactagggtgttacgtcttcaaaaatatctcatgcttttc
aatccagatgcttcattgaattcttatttggttgtacctactacatcttatttaccaaat
aaaactgtcatcgattggaaattcgtagaattaataaatgaaaatctaactatccttcct
gaaatagtaccagaggagaaccggaaaaattataaatttgatcctgataaatatgaagat
gctgttgtcatgccctggtatcgaaatcaggatcaaccacaatacttttatgtggcagaa
atttgtaagaatttgagtccaaaatcttcatttcctggatctgaatatgccactttcgaa
gaatattacctgaaaaaatatgatatccaaatacagaacttttctcaacatctcttggat
gtagatcatacttccgcaaggcttaatttcttaactccaaggtatgtgaataggaaagga
gttgctttgccaacaagtagtgaagagacaaaaagggccaagagagaaaacttagaacaa
aagcaaatattggttccagaattgtgtgccatacatcctttcccagcatccttgtggcgt
aaagcggtctgtcttccatgtatattatatcggataaatgcattactgttagcagatcag
attaggaaaacagtggcagttgaattattattaggaaaagccgaacttgaagaaaatttc
aaatggccagctctcagttttggctggagtctctgtgatgtgataaaaaaaacaaaagaa
gaagaaatcaatatggaaactgagctgcctagtgaaatcatggaaagtaaaatctcagat
agaattgaatctatggagtgtaacgagtttgatctcgaaatagctcaaatcaccgatagt
gttgattccaacagtgatgaggaaaaatcaagctgggctataggaacttggtcgaatgat
atggctggattcgatcaagagggaacagaattcgccataaaatatagttcacctactagt
tggatgatttcagatgattatgatgactattcttgttctgaatcattttactcagacgat
gattcaaatgatgatatcggaggttgtagaatagaatttactggtaattatctagcagaa
gcagtggagtcagaagaaataaaagaggaaattgtcgcaataaagcaatacaacagtgtt
tggtctgatattaattgtaatataggaaatgtagaggaattacaacaaaaatttgatgaa
gcttgtgatcaaaatatgaaaaaaattttaaaatcaggaatgcttctgaggaaggatcaa
gtgtttgtgaaaagtgatgaaatacaaaacacaccaaaaatctatgaaaacatatctgtt
tcagattttgatttcaatcagcttgatgtgacaccgtgcaagcttctttgtagtcctaaa
aaatttcaaaaaaccgtttataactgtgatatagaaaataatacttttaaatttgatgcg
caaccaccattagaaaatcatcctggtcctagtcctaacttgttattacaagctttaact
atgtcaaacgctaatgatggtattaatttggaaagacttgagacaataggtgattctttt
ttaaaatatgccattacaaattatttgtattctaagtacgaaaacatccatgaaggaaaa
ctaagtcatttacgttctaaacaagtaagtaatttaaatttatatcgcttgggaaaacgg
aaaaatctaggtgagtttatgattgccaccaagtttgatcctcatgacaactggttacct
ccatgtttttatgtcccaaaagagcttgaagaagctttgttggcagctcagtatcctgca
aattgttggacaatggctgatatggaagctacaagagatatgaccttggaagatatttgt
tctatggttaaggaaaaaggtgaagaaatggcttttccaaactccataccctataatctt
gttacccagcacagtattccagataaaagcattgctgattgcgtggaagctttaattggt
gcatatttgatagattgtggaccaagaggagcacttctttttatgtcatggttgggaata
aaagttttacctgttataaatgataaaacttatggtgaatttgaattacctcattctcct
cttctgaggcatgtaccaaattcagagaaggaactagaaactttactcaatggatataat
gagttggaagaccatattggttacaaattcaaagatcgttcttatttattacaagcctta
acacatgcttcttattcacccaatagaataaccgattgttatcaacgattggagttttta
ggagatgcagtactggattacctcataacaagacatctttatgaagattctagaatgcac
tcgccaggtgctttgactgatttacgttctgcattggtaaataatacaatatttgcatct
ttagctgtaagaaatgggtttcacaaatattttcgtcacttatcaccaggtttgaatgaa
gtaatagaaaaattcatcaggcttcaggaagaatgtggtcacagtatagtggaagaatta
taccttgttatagaaactgatgctgaagaagttgaggatgtagaagtacctaaagcactt
ggagatattttcgaatcggttgcaggagctattttcttagattcagagatgtctctggat
gcagtctgggcagtttattataaaatgatgaaggtagaaattgaacagttcagtaataaa
gtaccaaaatcaccaataagagaacttttggaactggagcctgagacagccaagtttgga
aagcctgaaaaattggcagatggaaggagagtaagagtttcagtagaagtttttggtaag
ggtacattcaaaggaattggaagaaattatcgtattgcaaaatgtactgcagctaaatgt
gctttaaagcatctgaaaagacaaggattaatcagacgaaatgagtaa
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integrated database retrieval system
