Harmonia axyridis (harlequin ladybird): 123678128
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Entry
123678128 CDS
T10650
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
haxr Harmonia axyridis (harlequin ladybird)
Pathway
haxr03013
Nucleocytoplasmic transport
haxr03015
mRNA surveillance pathway
haxr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
haxr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123678128
09122 Translation
03013 Nucleocytoplasmic transport
123678128
03015 mRNA surveillance pathway
123678128
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haxr03019
]
123678128
03041 Spliceosome [BR:
haxr03041
]
123678128
Enzymes [BR:
haxr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123678128
Messenger RNA biogenesis [BR:
haxr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
123678128
Spliceosome [BR:
haxr03041
]
Complex C
Other components
EJC/TREX
123678128
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
123678128
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Utp25_C
P-loop_SecA
MoaE
Motif
Other DBs
NCBI-GeneID:
123678128
NCBI-ProteinID:
XP_045470920
LinkDB
All DBs
Position
4:complement(15482947..15486356)
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AA seq
425 aa
AA seq
DB search
MADADDLLDYEDEEQTEQNTSEAVAAAEPKKGVKGTYVSIHSSGFRDFLLKPEILRAIVD
CGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPTENVVYVLVMCHT
RELAFQISKEYERFSKYMPTIKVGVFFGGLPIQKDEELLKNNCPHIVVGTPGRILALVRS
KKLNLKHLKHFILDECDKMLELLDMRRDVQEIYRNTPHGKQVMMFSATLSKEIRPVCKKF
MQDPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCVA
LAQLLTEQNFPAIGIHRNMSQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNY
DMPEDSDTYLHRVARAGRFGTKGLAITFVSEESDAKILNEVQDRFDVNITELPDEIDLSS
YIEGR
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgcagacgatcttctcgattatgaagacgaagaacaaactgaacaaaatact
tcggaggcagttgctgctgctgaaccgaaaaagggtgtaaagggtacttatgtatctata
cacagttctggtttcagagattttttgttgaaacctgaaattttacgtgccattgttgac
tgtggttttgagcatccctctgaagttcagcatgaatgtatcccacaagcagttcttggt
atggatattctgtgccaagccaaatccggtatgggtaaaactgccgtgtttgtattagca
acgctacagcaactagagccaactgaaaatgtggtttatgtattggtcatgtgccacact
agagaactcgctttccagatcagcaaggaatatgaaagattcagcaaatacatgccaaca
atcaaggttggtgtgtttttcggaggattgcctatccaaaaggatgaagaacttctaaag
aacaactgcccccacattgttgttggtacccctggaagaattttagcactagtccgatcc
aagaagctcaacttgaagcatttgaaacatttcattttggatgagtgtgataaaatgcta
gagctcttagatatgagacgtgatgttcaagaaatctatagaaatacaccacatggcaaa
caagttatgatgtttagtgcaaccttgagcaaagaaattcgtccagtgtgcaaaaaattc
atgcaagatcctatggaagtttatgttgatgacgaagccaaacttacattgcacggttta
caacaacattatgtaaaattgaaagaaaatgaaaagaataagaagctctttgaacttctt
gatgttttggaattcaaccaggttgtcattttcgttaaatctgttcaaagatgtgttgca
ttagcccaattattgacggagcaaaatttccctgccattggtatccatcgtaacatgtct
caggaagaaagactttcccgttatcaacagttcaaggatttccagaaacgtatactggta
gcaactaatttatttggaagagggatggatattgaaagagtgaacattgtattcaactac
gatatgcctgaggattcagacacttacctgcatagagtagccagagcaggtcgttttggt
accaaagggttagctatcaccttcgtttcagaggagagcgatgccaaaatcttgaatgaa
gtccaggatcgctttgatgtgaatattacagaattacccgatgagatcgatctaagttct
tacattgaaggaagatga
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