Harmonia axyridis (harlequin ladybird): 123678150
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Entry
123678150 CDS
T10650
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
haxr Harmonia axyridis (harlequin ladybird)
Pathway
haxr03018
RNA degradation
haxr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
haxr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123678150
09123 Folding, sorting and degradation
03018 RNA degradation
123678150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haxr03019
]
123678150
03041 Spliceosome [BR:
haxr03041
]
123678150
Messenger RNA biogenesis [BR:
haxr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123678150
mRNA degradation factors
5'-3' decay
Lsm complex
123678150
Spliceosome [BR:
haxr03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
123678150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Scm3
Motif
Other DBs
NCBI-GeneID:
123678150
NCBI-ProteinID:
XP_045470954
LinkDB
All DBs
Position
4:complement(16225270..16226351)
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AA seq
137 aa
AA seq
DB search
MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEVIDMVKEEAVVKNRGKEQKIGGRGGGGDRQMQRNRPAARGNFGGRG
SKPGQPNKKPLFQNKKQ
NT seq
414 nt
NT seq
+upstream
nt +downstream
nt
atgttgcctttatcgttattgagaactgcccaaaatcatcctatgctggtggaactcaag
aatggggaaacttacaacggtcatcttgtaagctgtgataattggatgaacataaacttg
agagaagttatttgtacatccagggatggtgacaaattttggaggatgcctgagtgttat
attaggggtagtacaattaaatatttgcgtataccagatgaggtaatagatatggtaaaa
gaagaagctgttgttaagaatagaggcaaagagcaaaaaattggtggtagaggaggtggt
ggagatcgtcaaatgcaaagaaatagaccagctgctcgaggcaattttggtgggagagga
agcaaacctggacaacccaacaaaaaaccactttttcaaaataaaaaacagtaa
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