Harmonia axyridis (harlequin ladybird): 123678548
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Entry
123678548 CDS
T10650
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16-like
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
haxr Harmonia axyridis (harlequin ladybird)
Pathway
haxr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
haxr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123678548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
haxr03041
]
123678548
Enzymes [BR:
haxr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123678548
Spliceosome [BR:
haxr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
123678548
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
WHD_HA2
HA2_C
Helicase_C
DEAD
AAA_22
AAA_19
Flavi_DEAD
AAA_30
SLFN-g3_helicase
nSTAND_NTPase5
SRP54
nSTAND3
TsaE
Motif
Other DBs
NCBI-GeneID:
123678548
NCBI-ProteinID:
XP_045471592
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All DBs
Position
4:43941485..43946859
Genome browser
AA seq
890 aa
AA seq
DB search
MSNKGERKKKRYETSSDSESVDSAEEARRKDLKERDDFAERLKERDEQKTRNIVQASERR
AYEEAAKRLKLENENREKIIPSLRIRSRRKYLEKRKEDKIQELEADIADDEYLFEEEILT
ERERKERQHKKELLKLAQEHEKARELERIQRYHMPKDMGTSDYVEVDELEKMPLSEQKKW
EKDQMSSAVFKFGARDAVKKDEYELLLEDLIEFIQALKLPGTKEDKKEPELTEYQKKKLD
IEETKKSLPVFPFRDDLIQAVKDYQVLIIEGETGSGKTTQIPQYLHEAGFTKDGKKIGCT
QPRRVAAMSVAARVAQEMNVKLGNEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDL
QSYSVMIIDEAHERTLHTDILFGLVKDIARFRPDLKLLISSATLDAQKFSEFFDDAPIFR
IPGRRFPVDIYYTKAPEADYVDACVISVLQIHATQPLGDILVFLTGQEEIETCMELLTDR
TRRLGSKVKELIILPVYANLPSDMQAKIFEPTPPGARKVILATNIAETSVTIDNIIYVID
PGFAKQNHFNSRTGMESLIVVPISKASANQRAGRAGRVAAGKCFRLYTAWSYKHELEDNT
IPEIQRINLGNAVLMLKALGINDLVHFDYLDPPPHETLILALEQLYALGALNHHGELTKL
GRRMAEFPVDPMMAKILLASEKYKCSEEIVTIAAMLSVNGALFYRPKDKSIHADTARKSF
NHIGGDHFSLLNVYNQWRDTEYSTQWCYDNFIQHRSLRRARDVREQLVGLMQRVEIEMVS
NPTEIDNIKKAITSGYFYHIARLSKGGNYKTVKHNQTVTIHPNSSLFEDLPRWLLYHELV
FTSKEFVRQVIEIESKWLLEVAPHYYKPKELEDSTNKKMPKTVGRSTMTA
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacaaaggagagcgtaaaaagaaacgctatgaaactagttcagattctgaaagt
gtagatagtgctgaagaagctcgtcgtaaagatttaaaggaaagagatgattttgctgaa
cgtttaaaggaacgagatgaacagaagacaagaaatatcgtacaggcatctgagagacgt
gcctatgaagaagcagctaaaagactcaagttggagaatgaaaatcgtgaaaaaattata
ccatcattgcgaattcgatccagaagaaaatatctggaaaaacgaaaagaagataaaatc
caggaattggaagcagatattgcagatgatgaatatcttttcgaagaagaaatcttgaca
gaaagggaacggaaagaacggcaacataagaaggaactattaaagttggctcaagaacat
gaaaaggcaagagagcttgaaagaatacagaggtatcatatgccgaaagatatgggtact
tcagattacgttgaagttgatgaacttgagaaaatgccactttccgaacaaaagaaatgg
gaaaaggatcagatgtcctcagcggtgttcaaatttggagctagagatgcagtgaagaaa
gacgaatatgagcttcttcttgaagatctaattgaatttatacaagctttgaaattgcct
ggaacaaaggaagataaaaaagaacctgaattaactgaataccagaagaaaaaattagat
atagaggagactaagaaaagcttaccagtatttccttttagggatgatcttattcaggct
gttaaagattatcaggttctcatcatcgaaggagaaacaggatcaggaaaaacaactcaa
attccacaatatcttcatgaagcaggcttcacaaaagatggcaaaaagattggatgcact
caaccaaggagggtagcagcaatgtctgtagctgcgagagtggcgcaagaaatgaatgtt
aaattagggaacgaagtaggttatgccatacgttttgaagattgtacttccgaaagaacc
atcataaaatacatgactgatggtaccttacatcgagaattcctgtctgaaccagattta
cagtcatacagtgtgatgattatcgacgaagctcacgaaagaaccctacatacagatatt
ctatttggcttggtcaaagatatagcaagattccggcccgatttaaaattattgatttcc
agtgcgacgctagatgcccagaaattttcagaatttttcgatgatgcacctatttttagg
attccgggacgtagattccctgtcgatatttattatacaaaagcacccgaagcagactat
gtggatgcttgcgtgatatcagtcctccagattcatgctacacaacctttaggggatatt
ttagtgttcttgactggtcaggaagagattgaaacttgcatggagttacttacagatagg
acaagaagattagggtctaaagtgaaggaactgatcattctacctgtgtatgccaacttg
ccaagtgatatgcaggctaagatcttcgagcccacacctccaggagctaggaaagtcatt
ctggctacaaatatagcagaaacatctgtcaccatagacaatataatttacgttattgat
ccaggattcgcgaaacagaatcattttaactcaaggactggaatggaaagtttgattgtt
gtcccaatatccaaggcttctgctaatcagagagccggtagagcaggtagggtagcagca
ggtaaatgcttccgattgtatactgcctggtcgtacaagcatgagctagaggataatacg
ataccggaaattcagagaataaatttgggaaatgcagtattaatgcttaaagctcttggg
attaatgatctagtccatttcgattacctggatcccccacctcatgaaactttgattttg
gctttggagcagctttatgctctgggggctttgaatcatcacggagaattaactaaattg
ggtaggaggatggccgagtttccagttgatcctatgatggccaaaatattgttggcatca
gaaaagtacaaatgttcagaagaaattgtaactatagcagccatgttatcagtgaatggg
gcgttattttacagacccaaagataagagtattcatgcagataccgcaagaaagagtttc
aaccatattggaggtgatcatttcagtttgctgaatgtgtataaccaatggcgtgatacc
gagtattcaacacaatggtgttatgataacttcatacaacacagatctttgagaagggct
agagacgtaagggaacaactagttggtttaatgcagagagtagaaatcgagatggtttct
aacccaacagaaatagataatatcaagaaagctataacttctggttatttctatcatatt
gccagactttcaaaaggaggaaattataaaactgtaaaacataatcagactgtaactatt
catccaaacagttcattgtttgaagatcttcccagatggcttctataccatgaactggtt
tttacaagtaaagagtttgtgaggcaggtaatcgagattgaaagcaagtggttattggaa
gtagctccccattattataaaccaaaggaactcgaagattcaacaaataagaaaatgcct
aagacggttgggagaagtacgatgactgcatga
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