Harmonia axyridis (harlequin ladybird): 123678550
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Entry
123678550 CDS
T10650
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16-like
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
haxr Harmonia axyridis (harlequin ladybird)
Pathway
haxr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
haxr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123678550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
haxr03041
]
123678550
Enzymes [BR:
haxr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123678550
Spliceosome [BR:
haxr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
123678550
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
WHD_HA2
Helicase_C
HA2_C
DEAD
AAA_22
AAA_19
Flavi_DEAD
AAA_30
nSTAND_NTPase5
SRP54
nSTAND3
Motif
Other DBs
NCBI-GeneID:
123678550
NCBI-ProteinID:
XP_045471595
LinkDB
All DBs
Position
4:43950830..43973753
Genome browser
AA seq
890 aa
AA seq
DB search
MSNKGERKRKRYETSSDSESVDSAEEARRKDLKERDDFAERLKKRDEQKTRNIVQASERR
AYEEAAKRLKLENENREKIIPSLRIRSRRKYLEKRKEDKIQELEADIADDEYLFEEEILT
ERERKERQHKKELLKLAQEHEKARELERIQRYHMPKDMGTSDYVEVDELEKMPLSEQKKW
EKDQMSSAVFKFGARDAVKKDEYELLLEDQIEFIQALKLPGTKEDKKEPELTEYQKKKLD
IEETKKSLPVFPFRDDLIQAVKDYQVLIIEGETGSGKTTQIPQYLHEAGFTKDGKKIGCT
QPRRVAAMSVAARVAQEMNVKLGNEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEPDL
QSYSVMIIDEAHERTLHTDILFGLVKDIARFRPDLKLLISSATLDAQKFSEFFDDAPIFR
IPGRRFPVDIYYTKAPEADYVDACVISVLQIHATQPLGDILVFLTGQEEIETCMELLTDR
TRRLGSKVKELIILPVYANLPSDMQAKIFEPTPPGARKVILATNIAETSVTIDNIIYVID
PGFAKQNHFNSRTGMESLIVVPISKASANQRAGRAGRVAAGKCFRLYTAWSYKHELEDNT
IPEIQRINLGNAVLMLKALGINDLVHFDYLDPPPHETLILALEQLYALGALNHHGELTKL
GRRMAEFPVDPMMAKILLASEKYKCSEEIVTIAAMLSVNGALFYRPKDKSIHADTARKSF
NHIGGDHFSLLNVYNQWRDTEYSTQWCYDNFIQHRSLRRARDVREQLVGLMQRVEIEMVS
NPTEIDNIKKAITSGYFYHIARLSKGGNYKTVKHNQTVTIHPNSSLFEDLPRWLLYHELV
FTSKEFVRQVIEIESKWLLEVAPHYYKPKELEDSTNKKMPKTVGRSTMTA
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacaaaggagagcgcaaaaggaaacgctatgaaactagttcagattctgaaagt
gtagatagtgccgaagaagctcgtcgcaaagatttaaaggaaagagatgattttgctgaa
cgtttaaagaaacgagatgaacagaagacaagaaatatcgtacaggcatctgagagacgt
gcctatgaagaagcagctaaaagactcaagttggagaatgaaaatcgtgaaaaaattata
ccatcattgcgaattcgatccagaagaaaatatctggaaaaacgaaaagaagataaaatc
caggaattggaagcagatattgcagatgatgaatatctttttgaagaagaaatcttgaca
gaaagggaacggaaagaacggcaacataagaaggaactattaaagttggctcaagaacat
gaaaaggcaagagagcttgaaagaatacagaggtatcatatgccgaaagatatgggtact
tcagattatgttgaagttgatgaacttgagaaaatgccactttctgaacaaaagaagtgg
gaaaaggatcaaatgtcctcagcggtgttcaaatttggagctagagatgcagtgaagaaa
gacgaatatgagcttcttcttgaagatcaaattgaatttatacaagctttgaaattgcct
ggaacaaaggaagataaaaaagaacctgaattaactgaatatcagaagaaaaaattagat
atagaggagactaagaaaagcttaccagtatttcctttccgggatgatcttattcaagct
gttaaagattatcaggttctcatcatcgaaggagaaacaggatcaggaaaaacaactcaa
attccacaatatcttcatgaagcaggcttcacaaaagatggcaaaaagattggatgcact
caaccaaggagggtagcagcaatgtctgtagctgcgagagtggcgcaagaaatgaatgtg
aaattagggaacgaagtaggttatgccatacgttttgaagattgtacttccgaaagaacc
atcataaaatacatgactgatggtaccttacatcgagaattcctgtcggaaccagattta
cagtcatacagtgtgatgattatcgacgaagctcacgaaagaactctacatacagatatt
ctatttggcttggtcaaagatatagcaagattccggcccgatttaaaattattgatttcc
agtgcgacgctagatgcccagaaattttcagaatttttcgatgatgcacctatttttagg
attccgggacgtagattccctgtcgatatttattatacaaaagcacctgaagcagattat
gtggatgcttgcgtgatatctgtccttcagattcatgcaacacaacctttaggggatatt
ttagtgttcttgactggtcaggaagagattgaaacttgcatggagttacttacagatagg
acaagaagattagggtctaaagtgaaggaactgatcattctacctgtgtatgccaacttg
ccaagtgatatgcaggctaagatcttcgagcccacacctccaggagctaggaaagtcatt
ctggctacaaatatagcagaaacatctgtcaccatagacaatataatttacgttattgat
ccaggattcgcgaaacagaatcattttaactcaaggactggaatggaaagtttgattgtt
gtcccaatatccaaggcttctgctaatcagagagccggtagagcaggtagggtagcagca
ggtaaatgcttccgattgtatactgcctggtcgtacaagcatgaattggaggataatacg
ataccggaaattcagaggataaatttgggtaatgctgtattaatgcttaaagctcttggg
attaatgatctagtccatttcgattacctggatcccccacctcatgaaactttgattttg
gctttggagcagctttatgctctgggggctttgaatcatcatggagaattaactaaattg
ggtaggaggatggccgagtttccagttgatcctatgatggccaaaatattgttggcatca
gaaaagtacaaatgttcagaagaaattgtaactatagcagccatgttatcagtgaatggg
gccttattttatagacccaaagataagagtattcatgcagataccgcaagaaagagtttc
aaccatattggaggtgatcatttcagtttgctgaatgtgtataaccaatggcgtgatacc
gagtattcaacacaatggtgttatgataacttcatacaacacagatctttgagaagggct
agagacgtaagagaacaattggttggtttaatgcagagagtagaaatcgagatggtttct
aacccaacagaaatagataatatcaagaaagctataacttctggttatttctatcatatt
gccagactttcaaaaggaggaaattataaaactgtaaaacataatcagactgtaactatt
catccaaacagttcattgtttgaagatcttcccagatggcttctataccatgaactggtt
tttacaagtaaagagtttgtgaggcaggtaatcgagattgaaagcaagtggttattggaa
gtagctccccattattataaaccaaaggaactcgaagattcaacaaataagaaaatgcct
aagacggttgggagaagtacaatgactgcatga
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