Harmonia axyridis (harlequin ladybird): 123678867
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Entry
123678867 CDS
T10650
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
haxr Harmonia axyridis (harlequin ladybird)
Pathway
haxr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
haxr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123678867
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haxr03021
]
123678867
03036 Chromosome and associated proteins [BR:
haxr03036
]
123678867
Transcription machinery [BR:
haxr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
123678867
Coactivators
SAGA/TFTC/STAGA complex
123678867
Chromosome and associated proteins [BR:
haxr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
123678867
STAGA complex
123678867
TFTC complex
123678867
SAGA complex
123678867
SLIK complex
123678867
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_SPT8
WDR54
Beta-prop_HPS5
Beta-prop_DCAF4
PEP5_VPS11_N
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
WD_LRWD1
Beta-prop_Vps41
DUF7226
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
123678867
NCBI-ProteinID:
XP_045472078
LinkDB
All DBs
Position
4:1202765..1206505
Genome browser
AA seq
666 aa
AA seq
DB search
MNNAMAGNNTSVEDVNKSHLAAVLQILKKYNLKNTEELFKKEANISDGLESSSNLQRESN
VSSVLTGYKSDGDPETYINSYRELKNFVEDSLDIYKHELGTILYPILVHMYLELVYNGHT
EKAITLMKAFGPEQDSYYQDDLRKLALVTNREHMNGNELTDTFKSHQFIIRMSRDTLSLL
KRHLNDRKASVLLNIVQEHLYFDMYEGVARNKSQIDATSGAVGGEAKRQDNKVKVFYGIP
KAPDIQSLAAPIEEEDGEDQENPEKPKKKKAKKDPLFSKKTKSDPNAPPPDRIPAPDLKD
NDKLEKVKALREASKRVTLGPETLPSVCCYTLMNTSQSVCCAEITEDSSMLAVGFSDAVI
KVWSLVPQKLKTLKSAQQLQEVNIDAEDLMVRIMNERSGEICRTLTGHAGPVYAVSFSPD
RTLLLSCSEDSTIRLWSLQIWTSLVVYKGHLFPVWDVKFSPLGYYFASASHDRTARLWAT
DHYSPLRLFAGHFSDVDCLQFHPNSNYIATGSSDRRVCLWDCTTGNHVRLMTGHKAPIHA
LAFSVCGRFLSSSGADCRVLIWDLSHGHLVAELTGHEKPVHTLNFSRCGNILCSGGLDFS
LKVWDFSKITEDISSEEVNVSHNPDIKTGEQYLLRDFATKSSPLIHLHFTRRNLLLAVAT
YDGSNP
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgaataacgctatggctggtaataatacctcggtagaagatgtgaacaaatcgcatcta
gctgccgtgttgcagattttgaaaaaatacaacctgaagaatactgaggaactcttcaag
aaagaagctaatattagtgacggcttggaatcctcgtcaaatttacaaagagaatctaat
gttagtagtgtattgactggatataaaagtgatggagatccagaaacatatattaattct
taccgtgaattgaaaaatttcgttgaagattctctagacatatataagcatgaattggga
acgattttataccctattcttgtccatatgtacttggaattggtgtataatggtcataca
gaaaaagcaataactttgatgaaggcatttggtccagaacaagattcatattatcaagat
gacttaagaaaattagctttagttactaacagagaacacatgaatggaaacgagttgact
gataccttcaaatctcatcaattcatcataaggatgtcgagagatacattgtcattatta
aagagacatttaaatgatagaaaggcttcagttctgctgaatattgttcaggaacattta
tattttgatatgtatgaaggtgttgcaaggaataagagtcaaatagatgctacttctgga
gcagttggtggtgaagctaaaagacaagataataaagtcaaagttttttatggtattcca
aaggcacctgatatacaaagcttggctgctccaattgaagaagaagatggtgaggatcag
gaaaatccagaaaaacccaaaaagaaaaaggcgaagaaggatcccttgttttccaaaaaa
accaaatctgatccaaatgcaccacctccagatagaataccagcccctgatttgaaagat
aatgataaattagaaaaagtaaaagcattacgtgaagcatcaaaaagagtcactctggga
ccagaaacattaccgtcagtttgctgttatactctaatgaatacaagtcaatcggtatgt
tgcgccgaaatcactgaagactctagtatgttagcagtgggtttcagcgatgcagtcatc
aaagtttggagtttagtacctcaaaaacttaagacactaaaatccgcccaacaactacaa
gaagttaacattgatgcggaagatctcatggtgagaatcatgaatgaaagatctggagag
atttgccgtacactaacaggacatgccggtccagtttatgcagtgtccttttcaccagat
cgtactcttctgctgagttgttcggaagattcaacgattcgattgtggagtctgcagata
tggaccagtctggtggtttacaaaggacatttgttcccagtgtgggatgtcaagttttct
cccctgggatattattttgccagtgcttcgcacgacagaactgcaagactgtgggctacc
gatcattattctccattgagattgtttgcgggacacttttctgatgttgactgcctccaa
ttccacccgaactcaaactacatagcgacaggatcaagcgacagaagggtatgcttgtgg
gattgcaccacaggaaatcacgtccggttgatgaccggccataaggctccaattcatgcg
cttgccttcagtgtctgcggacggtttctgtcctcttccggagcagattgtagagtcctc
atttgggacttatctcacggtcatttggtagctgaactcacaggacacgagaaacccgta
cacaccctaaacttcagccgatgtggaaatattctttgttccggcggattggacttcagc
ctaaaagtttgggacttcagcaaaattacggaagacataagctccgaagaggtgaacgtg
tctcataatcccgatataaagactggtgaacagtatttactaagagatttcgctactaaa
agtagtccgttgatacatttgcattttacaagaaggaatcttttattggctgttgccact
tatgacggttctaatccttag
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