Harmonia axyridis (harlequin ladybird): 123679159
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Entry
123679159 CDS
T10650
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
haxr Harmonia axyridis (harlequin ladybird)
Pathway
haxr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
haxr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123679159
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haxr03019
]
123679159
Messenger RNA biogenesis [BR:
haxr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
123679159
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
123679159
NCBI-ProteinID:
XP_045472541
LinkDB
All DBs
Position
4:complement(26194052..26214753)
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AA seq
450 aa
AA seq
DB search
MADDVENDDNWLYGENNDNVLKETDKEPIPDRVKPSEETPSPVALPPIGDGPPGVDNEND
IENDAQNDEKEEGEVENKLNDDDSDKEDLEEDSDDDVNVVIGDIKTTPSYTALNVKRSTL
INSAAVDKTKQVAGKFTIEEFDQVGMINGVPATDYNLDSLEDKPWRKPGADITDYFNYGF
NEDTWKAYCERQKRIRVSESGIGLQPLNSIGLPRGPVPISNDNSKYANNFAGIRKAGPPP
GRRMTGSIDVLGGEQPKENVIQVMTADRREYSRKPPGFPDMSVPPPAATFESFQPEYGFN
PEPDPYFGGYEPTQDCQWGAVNTPAWAPSDIKSLTPGPASMPHNMPMGPPVGMSGPTLSV
RDRERDRDRSPSHHRDERDREREHDRDRDRDRDSKVRERSEKPRDRERERSHRRERSRSR
SRRHKSRSRSPSHRSHRKKKSRRHEDRDSE
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgatgtggagaatgatgataactggctttatggcgaaaacaatgataatgtt
ttgaaagaaactgataaagagcctattcctgatagagtgaaaccttctgaagaaacacct
tcacctgtagcattgccgcctattggtgatggccccccaggagttgacaacgaaaacgac
attgagaatgatgcacaaaatgatgaaaaagaggaaggagaggtagaaaacaaattaaat
gacgacgatagtgataaagaagatttagaagaagatagtgatgatgatgtaaatgttgta
attggagatattaaaactacaccttcttacactgccttaaatgttaagaggagcacactt
atcaattcggcagctgttgacaagaccaaacaggtagcaggcaaattcaccattgaagaa
tttgatcaagttggtatgataaatggagtacctgcaactgattacaatttagattcttta
gaagataaaccttggaggaaaccaggtgctgatataacagattatttcaattatggtttt
aatgaagatacatggaaagcttattgcgaaaggcaaaaaagaattcgtgtgtcagagtca
gggataggactccaacctttaaattctataggtttacctcgtggacctgttcctatatcc
aatgataatagtaaatatgctaataactttgctggtatcagaaaagcaggaccacctcct
ggtagaagaatgactggctctatagatgttcttgggggtgaacaacctaaggaaaatgtt
atacaggtgatgactgctgatagaagagaatacagcagaaaaccacctgggtttccagat
atgtctgttcccccaccagcagccacttttgaatcatttcaaccagaatatggctttaat
ccggaacctgatccatattttggtggatatgaaccaactcaagattgccaatggggtgca
gtgaatacacctgcatgggcgccttctgacatcaaatctctcacacctggtccagcttct
atgcctcataatatgccaatgggtccaccagttggtatgtcaggtcctactttatcagtt
agagatagggagagggatagagatcgtagtccctcccaccatagagatgaaagagacaga
gaaagagaacatgatcgagatagggatagagatcgtgatagtaaagtcagggagaggtcc
gaaaagccaagagatagagaaagggaaaggtctcatagaagagaaaggtcaaggagtaga
tctagacgtcataaatccaggtctagaagtcccagtcatagatctcataggaaaaagaag
tcaagaaggcacgaagatagagacagtgaataa
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