KEGG   Harmonia axyridis (harlequin ladybird): 123679693
Entry
123679693         CDS       T10650                                 
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
  KO
K12828  splicing factor 3B subunit 1
Organism
haxr  Harmonia axyridis (harlequin ladybird)
Pathway
haxr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:haxr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    123679693
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:haxr03041]
    123679693
   03036 Chromosome and associated proteins [BR:haxr03036]
    123679693
Spliceosome [BR:haxr03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    123679693
 Complex B
    123679693
 Complex C
   U2 SnRNP specific factors
    123679693
Chromosome and associated proteins [BR:haxr03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    123679693
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT_ECM29 HEAT_2 Htt_N-HEAT_1 XMAP215_CLASP_TOG Cnd1 UME APC1_C B56
Other DBs
NCBI-GeneID: 123679693
NCBI-ProteinID: XP_045473059
LinkDB
Position
5:2143640..2158981
AA seq 1323 aa
MDNIPRTHEDIEAQIREIQSKKKEIPVEDPDKGAKLGESGYFDSEIYDNGMGKGKYEGYV
TSIAANDEVDDDEEDVGFSQKRTGLGAPAALLNDVARSEKDYDPFADRRRPTIADREDEY
RQKRRKMIISPERVDPFADGGKTPDLNARGYSQIMKEQILKGEENEIRKKILDKAKDGSL
KVINGESKGPKKRGRWDQTIDEVFVPSKKKILSVSTPSGAEAATPVWGDADKTPADHRWD
ETPGHKGSETPGATPGQSTRQWDATPGAATPGRETPGHDKSVSRRNRWDETPKTERETPG
HSSGWAETPRTDRTGADLIQDTPTPGASKRRSRWDETPSAATPSQTMTPGAMTPQTPHGT
PGHATPLMTPGGSTPVGVKAMAMATPTPGHLASMTPEQLQAYRWEREIDERNRPYTDDEL
DSMFPPGYKILPPPAGYIPIRTPARKLTATPTPLIGGTPTGFFIQQEDRSAKYLDNQPKG
QNLPFMKPEDAQYFDKLLVDVDEDALSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITD
KAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPL
LIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGI
PSLLPFLKAVCRSKKSWQARHTGIKIVQQIAILMGCAILPHLKSLVEIIEHGLVDEQQKV
RTITALGIAALAEAATPYGIESFDSVLKPLWRGIRTHRGKGLAAFLKAIGYLIPLMDAEY
ANYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCSTDGVESQYIKDEILPQFFKHFWNH
RMALDRRNYRQLVDTTVEIANKVGASEIINRIVDDLKDENEQYRKMVMESIEKIMGNLGA
ADIDSRLEEQLIDGILYAFQEQTTEDVVMLNGFGTIVNQLGKRVKPYLPQICGTILWRLN
NKSAKVRQQAADLISRIAIVMKTCQEEKLMGHLGVVLYECLGEEYPEVLGSILGALKAIV
NVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFE
LLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAE
TCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVAPLLEDALMDRD
LVHRQTACAAIKHMALGVYGFGCEDALIHLLNYVWPNIFETSPHLVQAFMDAIEGMRVAL
GPIKILQYSLQGLFHPARKVRDVYWKIYNSLYIGGQDSLVAGYPRITNDPKNQYIRYELD
YVL
NT seq 3972 nt   +upstreamnt  +downstreamnt
atggataatatacctaggacacacgaagatattgaagcccagattcgggaaattcaatcc
aaaaagaaagaaatccctgtagaagatccggataaaggtgcaaaattaggagagagtgga
tacttcgatagtgaaatttatgataatggaatgggcaagggaaaatatgaaggatatgtc
acatcaatagcggctaatgatgaggtcgatgatgatgaggaggatgttgggttttcacaa
aaaagaacgggtttgggggctccagcagcacttctcaatgatgttgctaggagtgaaaaa
gattatgatccatttgctgatcgtcgaagacctacaattgcagatagggaagatgaatat
aggcaaaaaagaagaaaaatgatcatctccccagaacgtgtagatccatttgctgatgga
ggaaaaacgccagatctgaatgcacgtggatactctcagattatgaaagagcagattctc
aaaggagaagaaaacgaaatacggaaaaaaattctagacaaagcgaaggatggttcactt
aaggttattaacggagaatcaaaaggacctaagaagagggggcgttgggatcaaaccatt
gatgaagtttttgttccgagtaagaagaaaatactgtctgtttctacaccaagcggcgca
gaagctgcaacacccgtatggggagacgcagataaaaccccagcggatcatcgttgggat
gaaactccaggccacaagggcagcgaaacaccaggggcgactccgggtcaatcgacaaga
cagtgggacgcaacacctggagctgccacaccgggtcgtgaaactcctggacacgataag
agcgtctcgagaagaaatcgttgggacgaaacccccaagactgagagagaaactcctggc
cattcgagcggttgggctgagacccccagaacggacagaactggcgctgacttgattcaa
gacactccaactccgggagcatctaaaagaagatcacgatgggatgaaacaccctctgcg
gcaacgccttctcaaacgatgactcctggggccatgacaccccaaactcctcacggaacc
ccaggacatgccacacctctgatgacaccgggaggttctacacctgttggcgttaaagcc
atggccatggccacaccgactccaggccatttggcatccatgacgccagagcagcttcaa
gcctaccgatgggaaagagagatcgatgagagaaacagaccttacacagacgatgaatta
gattctatgtttccaccaggttataaaatcttgcctccacctgctggttatattccgata
agaacaccagctcgtaaacttaccgcaactcccacacccttgattggaggtaccccaacc
ggcttcttcattcagcaagaggacaggagtgccaaatatctagataatcagccgaaagga
caaaatttacccttcatgaaaccggaagacgcacaatacttcgacaagttgttggtggac
gttgacgaagatgctctcagtcctgaagaacaaaaagagaggaaaatcatgaagttgctg
ctcaaaattaagaatggaactccaccgatgagaaaagcggccctgaggcagatcaccgat
aaggctcgcgaattcggggccgggccacttttcaaccagatcttgccccttttgatgagt
cccactctcgaagatcaagaacgtcatcttttagtcaaggtcatagacagaattttgtac
aaactcgacgatctggtgagaccgtacgtccacaagattctcgtcgtcatcgaacccttg
ctcattgatgaagactactatgccagagtggagggtagggagattatctcgaatctcgcc
aaagctgcgggtctagcaactatgatttccacgatgagaccggatatcgataatatagat
gaatacgtgagaaacaccaccgccagggcgtttgccgttgtggcttcagcgctcggaatc
ccctcgcttttgcccttcttgaaagccgtgtgcaggtccaaaaaatcatggcaagctaga
cataccggtattaaaatcgttcagcagatagccatcttgatgggttgtgccattctacct
cacttgaagtcgttagtagaaatcatcgagcacggtctagtagacgaacaacagaaagtt
aggaccatcactgctttaggtatagctgccctggctgaagctgcaacaccctacggtatc
gaaagtttcgactccgtactgaaacctctgtggagaggtataagaacgcacagaggaaaa
ggtctagccgctttcctcaaagccattggatatctgatacccctcatggacgccgaatac
gccaattactacaccagagaagtgatgctgattttgatccgagagttccagtctccagac
gaagaaatgaagaagatcgtcctgaaggtggtgaagcaatgttgttcgacggacggtgtg
gaatctcagtacatcaaagacgagatcctaccgcagttcttcaaacacttctggaatcac
aggatggccttggacagaagaaactacaggcaattggtggatacgaccgtggagatcgcc
aataaagtaggagcttcggaaattatcaaccgaatcgttgatgatctcaaagacgaaaac
gaacaatacagaaagatggtaatggagagcatcgaaaagataatgggcaatttgggtgcg
gcagacatcgattcgcgattggaagaacagctcatcgacggcattctgtacgcgttccaa
gaacagaccaccgaagacgttgtaatgttgaacggtttcggaacgattgtgaaccagttg
ggaaagagggtcaagccttacctgcctcaaatatgcggtacgatcctttggaggttgaac
aacaaatccgcgaaggtacgtcagcaagccgccgatctcatttcgcgcatcgccatcgtt
atgaaaacgtgtcaagaagagaaactgatgggtcacttgggcgtggtactttacgaatgt
ctgggagaagaataccccgaagtcctaggttccatattgggggcgttgaaggccatcgtt
aacgtgattggtatgacgaagatgactccgcccattaaggatctgctgccacgcctcacg
cccatcctgaagaatcgtcacgagaaagtgcaggagaactgcatcgatttggttggaagg
atcgccgataggggtcccgaatacgtgtccgccagagagtggatgaggatctgtttcgaa
cttttggaattgctgaaggcccacaagaaggccattcgtcgagccaccgtgaacaccttc
ggctacatagccaaggctataggtccccacgacgtgttggcgacccttctgaacaacttg
aaggttcaagagagacagaacagggtttgtacgacggtggccatcgctatagtggcggaa
acttgttcccccttcaccgtgctgccagccctgatgaacgagtatcgagtgcccgagctg
aacgtacagaacggtgtcctgaaatcgctctctttcctcttcgagtacatcggagagatg
ggcaaagattacatttacgccgtggccccccttctcgaggacgcgttgatggacagggat
ctggttcacaggcagacggcctgcgccgccatcaaacacatggctttgggagtttacggt
ttcggatgcgaggatgccctgatccatctgctgaactacgtctggcccaatattttcgaa
acttcgccccatcttgtgcaggcgtttatggacgctatagaagggatgagagtcgccctg
gggccgattaaaattctacagtactcgttacagggtctgtttcatcctgccagaaaagta
agagatgtttattggaaaatatacaactcgctttatattggggggcaagattcattagta
gctggatatccaagaataacaaatgatcctaaaaaccagtacatccgatatgaactagat
tatgttctttaa

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