Harmonia axyridis (harlequin ladybird): 123679739
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Entry
123679739 CDS
T10650
Name
(RefSeq) CCR4-NOT transcription complex subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
haxr Harmonia axyridis (harlequin ladybird)
Pathway
haxr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
haxr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123679739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haxr03019
]
123679739
Messenger RNA biogenesis [BR:
haxr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123679739
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
123679739
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
PCSK9_C2
Motif
Other DBs
NCBI-GeneID:
123679739
NCBI-ProteinID:
XP_045473140
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Position
5:10757815..10760067
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AA seq
624 aa
AA seq
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MAASRKLQGEIDRCLKKVTEGVETFEDIWQKVHNATNSNQKEKYEADLKKEIKKLQRLRD
QIKSWIQSGEVKDKSVLMDNRKLIETQMERFKVVERETKTKAYSKEGLGAAQKLDPAQKE
RDEIQHWLVNSIEQLNIQSDAFECEIESLQANKKKKLDKDKQERVDEYKARLEKHRFHIK
KLETLLRMLDNMSVEVSQIKTIKDNVEYYVESSQEPDFEDNEFIYDDIIGIDDVEIAGTG
IPSSVTTDSNETAGSPTSMISGSSPIPSPSPSGSQPYIHSSDSSNESEKKANEEVPKPIK
PTPVRLTSTMMMNCSTNSLLSTSCSSVSSMTPISNNTKPVLISSTPSKSSIVREASPVPP
LSTSGNFATVTANNVPIKSSQSVSENVLTNVGMVNNSNQVSAQNLSSSVNSPIQNMNTSQ
NQVDGMSSLKTMAQQVIDRVGLEANLSLEQSKNHSQGQKSEAHIPPLLGVAPLGAVPLQK
EHQSQFQYMESAFYHMPHPSDSERIRPYVQRTPYPTQTYYIQAPLPLSDTLEFYQRLATE
TLFFVFYYMEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKVINEEYEQGTYIYFDY
EKWGQRKKEGFTFEYKYLEDRDLN
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggctgctagtagaaaactccagggtgaaatagataggtgtctcaagaaggtaactgaa
ggagtagaaactttcgaagatatttggcaaaaagtccataatgcaacaaatagcaaccaa
aaggagaaatatgaggctgacctcaagaaggagattaaaaaacttcaaagactgcgagac
caaattaagagttggattcaatcaggtgaagtcaaggataaatcagttttaatggataac
agaaaacttatagaaacccaaatggaaaggttcaaagttgtagaacgagagacaaaaact
aaagcatactcaaaagagggattaggagctgcccaaaaactagatcctgcacaaaaagaa
agagatgaaatccaacattggttagtgaattctatagagcaattgaatattcaatcagac
gcctttgaatgtgaaatagaatctttacaagcaaataaaaaaaagaaactggataaagat
aagcaagaaagggttgacgagtataaagcaagattagaaaaacatcggtttcatataaaa
aagttggaaactcttttgagaatgttagacaatatgtcggtagaagtatcacaaataaaa
actataaaagataatgttgaatattatgttgagtcatctcaggagcctgattttgaagat
aatgaattcatttatgatgatattattggaattgatgatgttgaaattgctggtacagga
attccttcttcagtaactacagatagtaatgaaactgctggatctcctacttccatgata
tcgggttcatctcctattccatcaccatctcctagtggtagtcagccatatattcattct
agtgatagttctaatgaatctgagaagaaagctaatgaggaggttcctaaaccaatcaaa
ccaactcctgttaggcttacttccacgatgatgatgaactgtagtacaaattctttgcta
agtacaagttgcagtagtgtttcatctatgactccaattagtaataatactaaaccagtg
ttgataagcagcacaccaagtaaatcatctatagtaagagaagcatctccagtgccacca
ttgtcaacatctggtaacttcgcaactgtaacggcaaataacgttccaataaaatccagc
caaagtgttagtgaaaacgtactaacgaatgtaggaatggtaaataactcaaatcaagtt
tctgctcaaaatttgtcttcatctgtcaatagtccaatccaaaatatgaatacttctcaa
aatcaagttgatggtatgtcttcactaaaaactatggcccaacaggtaattgatagggta
ggtttagaagctaacctgtcattagaacagagtaaaaatcatagccaaggacaaaaatct
gaagcacacattcctccattacttggtgttgcacctttaggggccgtacctcttcagaag
gaacatcagtcacaatttcagtatatggaatcagcattctatcatatgccacatccttca
gattctgaaagaatacgaccttatgttcaaaggacgccatatccaactcagacttactat
attcaggctcccttacctttgtctgatacactggaattttatcaaagactagctactgaa
acccttttttttgtgttttattacatggaaggcactaaggcacaatatcttgcagccaaa
gctttaaaaaaacaaagttggaggttccatacgaaatatatgatgtggtttcagagacat
gaagaacctaaagtgataaacgaagaatatgaacaagggacatatatatattttgattat
gaaaaatggggacaacgaaaaaaagaaggctttacgtttgaatataagtacttagaagat
agagacttgaattga
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