Harmonia axyridis (harlequin ladybird): 123681297
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Entry
123681297 CDS
T10650
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
haxr Harmonia axyridis (harlequin ladybird)
Pathway
haxr03020
RNA polymerase
haxr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
haxr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
123681297
09124 Replication and repair
03420 Nucleotide excision repair
123681297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haxr03021
]
123681297
03400 DNA repair and recombination proteins [BR:
haxr03400
]
123681297
Enzymes [BR:
haxr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
123681297
Transcription machinery [BR:
haxr03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
123681297
DNA repair and recombination proteins [BR:
haxr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
123681297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
123681297
NCBI-ProteinID:
XP_045475574
LinkDB
All DBs
Position
5:complement(33465081..33475341)
Genome browser
AA seq
1175 aa
AA seq
DB search
MYDLEEDQYEEDETEEISSELWQEACWIVINSYFDEKGLVRQQLDSFDEFIQMSVQRVVG
DSPLIELQAEPRHIAGEIENPTRYTLKFEQIYLSKPTHWEKDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIRDGEDPVVTQHQKTFIGKIPIMLRSTFCLLNGLTDRDLTELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAMKDGKYAYKCEIRSCLEHSSRPTSTLWVNMM
ARGGQATKKAAIGQRIIAVLPYIKQEIPIIVVFRALGFVADRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGARPGVTKEKRIKYAREILQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLSFLFRGLFRNLIKEVRMYSQ
KFIDKGKDFNIDLAIKPKLITDGLRYSLATGNWGDQKKAHEARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMICPAETPEGAAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEIAPSAIANATKIFVNGCWVGIHRDPEQLMSTLRKLRRQMDIIVSE
VSMIRDIRDREIRIYTDAGRICRPLLIVENGTLLLKKKHIDMLKQRDYNNYGWQDLVSYG
AVEYIDTLEEETVMIAMSPDDLRQEKEYAYCTTYTHCEIHPAMILGVCASIIPFPDHNQS
PRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPHKPLVTTRSMEYLRFRDLPAGINSI
VAIACYTGYNQEDSVILNASAVERGFFRSVFYRSYKDSESKSMRDQEEQFEKPTRQTCQG
MRNALYDKLDDDGIIAPGLRVSGDDVIIGKTMILPERDDELDGTTKKYTKRDASTFLRNS
ETGVIDQVMLTLNADGHKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCE
GLTPDIIINPHAIPSRMTIGHLIECIQGKVSALKGEIGDATPFNDAVNVAKISTLLQEYG
YQLRGNEVMYNGHTGRKINAQIFFGPTYYQRLKHMVDDKIHSRARGPLQILVRQPTEGRG
RDGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRIHVCNFCGLIAIANLRNHTFECKG
CKNKTQISQVRLPYAAKLLFQELMAMNIAPRLMVT
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgtatgatttggaagaagatcaatatgaagaagatgaaactgaggaaatcagttcagag
ttgtggcaagaagcttgttggattgtcatcaattcatattttgatgaaaagggtttggtt
cgccaacagttggacagttttgatgaattcatacaaatgtctgttcaacgagtcgtagga
gattccccactgatcgaattacaggctgaaccacgtcatattgctggagaaatcgaaaac
cctacacgttatacattaaaatttgaacaaatttacctttcaaaacccacacattgggag
aaagatggtgcaccatctcccatgatgcctaatgaagcacgtttaagaaacttgacttat
tctgcaccattgtatgtagatataactaaaactgtgatcagagatggggaagatcctgtt
gttacacaacatcaaaaaacatttataggaaaaatcccaattatgctgaggtccacattt
tgcttgttgaatgggctaacagatcgtgatttgacagagttgaatgaatgtccattagat
ccaggtggctattttataatcaatggatctgaaaaagtactcatagcacaggaaaagatg
gctacaaatactgtttatgtgtttgccatgaaggatggaaaatatgcttacaaatgtgaa
attaggtcatgcttagaacacagttcaagaccaacttccacattatgggtaaatatgatg
gcaagaggtggtcaagcaacgaaaaaagcagccattggccaacgtataattgcagtttta
ccctatattaaacaagaaatcccaattatcgttgtcttccgagcgcttggttttgtggct
gatcgtgacattcttgaacacataatttatgattttgaggacccagagatgatggaaatg
gtcaaaccgtctctcgatgaagcgttcgtcatacaagaacaaaatgttgcattgaatttc
attggttccagaggtgctagaccaggtgtcactaaagagaagcgtatcaaatatgcaagg
gaaattttacagaaagaaatgttaccccatgtgggtgtttctgatttttgtgaaactaag
aaggcatacttcttagggtacatggtacatcgactacttttggcagctcttggcagaaga
gaattagatgaccgtgatcactatggaaataagagattggatttggccggtcctttattg
tcgtttttgtttagaggcttattcaggaacttgatcaaggaagtacgaatgtattcccag
aagttcatcgataaaggaaaagacttcaatatcgacttggccatcaaaccaaaacttata
accgacggtttacgttattctttagctaccggtaattggggtgatcagaaaaaagctcac
gaagcgcgtgccggagtgtctcaggtgttgaacagactgactttcgcctcaacattgtcc
catttgcgtagggtcaactctccgataggaagagatggtaaattggccaagccccgtcaa
ttacacaacactctttggggtatgatttgtcctgctgagacgcccgaaggtgctgctgta
ggactagtaaagaatttagctctgatggcttatatctctgtcggttcccaaccgtctccc
atccttgagttcttggaggagtggtctatggaaaatctcgaggaaatcgcgccatctgcc
attgccaatgctactaaaatctttgtgaacggatgctgggttggtatacatagagacccc
gaacagttgatgtccactttgagaaaacttagacgtcagatggacatcatcgtatctgaa
gtttcgatgattcgtgatattagggacagagagataagaatttatacggatgcgggaaga
atatgtagacctctattgatcgtagaaaatggtacattgttattgaaaaagaaacatatc
gatatgttgaaacagagggattataacaattatggttggcaagatcttgtatcttatggt
gctgttgagtatatcgatactttggaagaagaaacagttatgattgctatgtcgccggat
gacttgagacaagaaaaagaatatgcatattgtacaacttatacacattgtgaaattcat
ccagctatgattttgggagtttgtgcttccatcatcccattccctgatcacaaccaaagt
ccgagaaatacatatcagagtgctatgggtaaacaagctatgggcgtatatattactaat
ttccacgtgcggatggacactttggcccatgtcctttactatcctcacaaacctttggta
acgaccagatcgatggagtacttacggttcagagatttacctgcaggaattaacagtatt
gtagctatcgcttgttatacaggatacaaccaggaagattctgtcatcttgaatgcgtca
gctgttgaacgaggtttcttcaggtctgtgttttatcggtcgtacaaagattccgaatcg
aaaagcatgagagatcaggaagaacaatttgaaaaaccgactagacaaacatgtcaaggt
atgagaaacgccctatatgataaattagatgatgatggaatcattgctcctggacttcgt
gtttctggtgatgatgtcatcattggtaagactatgatactaccagaaagagatgatgag
ttggatggaactactaagaaatacaccaagcgagatgcttctacattcttgcgaaacagc
gaaaccggagtaatcgatcaggtcatgcttactttgaacgccgatggccataaattttgt
aagatcagggtacgttcagtgcgtattccacagattggagacaaatttgcgtctcggcat
ggtcaaaaaggtacttgcggtatccaatacagacaagaggatatgccattcacatgcgag
ggactcactcctgacatcatcatcaaccctcacgctatcccctctcgtatgacaattggt
cacttgatcgagtgtatccaaggaaaagtatcggctctcaaaggagaaataggtgacgca
accccctttaacgacgctgttaacgtagcaaagatttccactctactccaggagtacggt
tatcagctgagaggaaatgaggttatgtacaatggtcacacaggtcgtaaaatcaatgcg
cagattttctttggccccacctattaccaacgtcttaagcatatggtagatgacaaaatt
cattctagggcaagaggtccactgcaaatcttggtgaggcagcctacagagggtagaggt
cgtgatggtgggttgcgtttcggtgagatggaacgagattgtcaaatttctcatggcgct
gcacaatttttgagggaaagattgtttgaagtgtccgatccctatagaatacatgtctgt
aatttctgtggtcttatagctatagcaaatttgaggaatcacactttcgaatgtaaaggc
tgcaaaaataagacccaaatttctcaggttaggttgccttatgcggcaaagttactgttc
caagagttaatggctatgaatatcgcaccaagactcatggtaacgtag
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integrated database retrieval system
