Harmonia axyridis (harlequin ladybird): 123681314
Help
Entry
123681314 CDS
T10650
Name
(RefSeq) spatacsin
KO
K19026
spatacsin
Organism
haxr Harmonia axyridis (harlequin ladybird)
Brite
DNA repair and recombination proteins [BR:
haxr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
123681314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spatacsin_C
GCP5-Mod21_C
TPR_18
Motif
Other DBs
NCBI-GeneID:
123681314
NCBI-ProteinID:
XP_045475609
LinkDB
All DBs
Position
1:78589326..78600423
Genome browser
AA seq
1769 aa
AA seq
DB search
MENKLKRTQSFTKETNAIWAAWLRMGNREVSREAVAKGTHVDLAIKFLSTRNEITQVDAE
TWFKNEVVIWVQELLRRKQIHKSKHILNNAGFDPLKELHNIFFLTNSVELRKYIGDHLIE
QKYMEEITKNLWTFLEIILVNRNSVAGSSICESVADLYKKSPEWQSKIASTLFLLVYDNH
LVPFIKPLDLFKYLIATSDELMKCWIALSFGNLECVEINCNSNLMDFFMKNTITEEMLLV
LNCQHLGLSKNLKEDIFNELCKYGVFMKDEKLDLIKLLKRFLKFDISTIYDVLQSEKSSV
DIKDFIKMLNDYCVENRIFSILGECSKYLPLENYKSLISSHVDLLIKYKQFKWDSEDSLR
TNIMATIDFIRKCDYKEYFERNPLVLCSLIIFNNDIKFLDAFHEKINVEGVEISKYYNTI
LSKFGIIRKLVDKNEENEVYSNKSYYALLEKHLKINTRKLFEYRYTNVELPHFNCDRLVQ
KYGYKKDLDYVFYLRELRPSIASKLVILEQVQIKDNSNKDEITNKQVKKVFKIALNSFEV
KELACSCICFLEMINVPSDKLKIYLNVVEILHESGYDSEQCKEMFQYHLEQNYFENIEEL
LETTVLFGIDFNFQSGQDFITAKEKYDIVIKFGRVNNSKLPEGFLKNCAMANDWLSFMLF
AQIYCYPADQIKEVCQCFKNPFYLEHILHCVTYDIQVEEENALMKGRDSRKAFLSRIGVR
LSSDPSGPYDIYSLKTQSVTRSDSLDVLEIDILNTKATLLQTLIRCHNSVDPPKALLQAC
HMYRHPILAILATCYEPDSVHTNWLTWLVVSCDLHRTYMNVEHIVTLAGTTMEVLNKAME
NRFPATLLQSFQIFFPNNGLKHFLKFLHLGIQHIFDLDLMSNELTAFKKSLKICRKSSIL
PEFDREITYLRNRFWIEETALTLMASALEYNFRSTYDQIAFLKVIKALEVQEMFCIEVPS
FYSILNILTALYEDGSNIRLDLSRALSLVHHREAVIKCQNDLLHQKNFSTALKVAQIGNL
PCDLVILMEWEDKLDNRVEDKSFWSDCNESFKFHGVTADRVVEFYSNSTDKITDELVKFE
VSKLAYQWAREFQLSFQYDLEKAMVLNYIKLEEKHKNPDLLDVHAETHLYKDILSKMEQL
PAKDSFADKDSEYKVSDLVSLALEKGNFFFALRLERMFPCKCVDLDVLKLCFSLAEGLLT
PSQLSMKDKTLLNKNSNFKSYSSSRRTLFSSRLSGLNTIVPYQYSSSPVINTDSNLEGGR
EEILSILRTLSEKLVSGSQIGSKIIQTYQVSLMLQVPYYTVLSNPDAGFLKKSLEKDCST
KLELVHDFVSIHKWSKVQVSDLICEQLVNHLQNYVETKADKPMMWDLNLNTHFHYILRLF
QRDCSILGRKIFNYAQVLFRSHMTSTHEIRMNELTFIVELIIKANDCFTSDCNMQGISNV
LNQCKTMVMHLVTLRSWKLIVRLLTGIARYTEMNYIFQILKDNDQFEYLLMKGSNRENSL
KIALLAYLKKNCPMEKDLYKMVALHFAMFSEVALLWENDAIGVIKNLIGISKLEMQNNKI
NPDTEPYVLFTNTEGTRLCLSKAMENYTYATEFYLQGEKLMKAMHTAKQAELIAMQLSLF
KGLSSSDTAVCVLDLEESQIVNLISSQLGFEQSLIVAEAYEYSPDWAAVLLKQCVLQNNT
NYLEQFLNHLPLTETLIREISRRFISIYATITPEGVQNMKEILNKLPSVHAKYQIASELS
FHDVVEDLLNTGQLCYLKDTVWKRGYRNS
NT seq
5310 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacaaactaaagagaacacaaagttttactaaagagaccaatgctatatgggct
gcatggttacgaatgggtaatcgagaggtttcaagagaggctgttgcaaaaggaactcat
gtagatcttgctataaagtttttatcaactagaaatgaaataacacaagttgatgctgag
acctggttcaaaaatgaagttgttatttgggttcaggaacttctaagaagaaaacaaatt
cataaatcaaaacatatcctaaataatgctggattcgacccattaaaggaactacataat
atattttttttaactaactctgtggaattaaggaaatatattggtgatcacttgatagaa
cagaaatatatggaagaaattacaaaaaatctctggacttttcttgaaataatacttgtt
aatcgaaatagtgttgctggttcttcaatctgtgaatctgttgctgatctatacaaaaag
agtccagagtggcagtcaaaaattgcatctactctatttcttctagtgtatgataatcat
ttggttccttttattaaacctttggatctttttaaatatttgattgctacaagcgatgaa
ctcatgaaatgttggatagctctaagttttgggaatctagaatgtgtggaaatcaattgt
aattcaaatttaatggatttcttcatgaagaataccattactgaggaaatgttgttagtt
ttaaactgtcaacatctagggttgtctaaaaatttgaaggaggatatattcaatgaacta
tgtaaatatggagtctttatgaaggatgaaaaattagatttgatcaagcttctgaaacgg
tttttaaaatttgatatttcgaccatttatgatgtattacaatcggaaaagtcttctgtg
gacataaaggattttattaaaatgttgaatgattattgtgttgaaaatcgaattttcagc
attttaggtgaatgttccaaatacttacctctggaaaattataaaagtttgatatcatcc
catgtagacttattaattaagtacaaacaatttaagtgggattctgaagatagcttaagg
acaaatataatggcgacaattgattttataagaaaatgtgattataaagaatactttgaa
aggaatccacttgttttgtgtagcttgattattttcaataacgacatcaaatttttggat
gcctttcatgaaaaaattaatgtagagggagttgaaatctcaaagtattacaatactata
ctttccaaatttggaataataaggaaattagttgataaaaatgaagaaaacgaagtgtat
agcaataagagttattatgctctactggagaaacatttgaaaataaatacaagaaaactg
tttgaatacagatatacaaatgtagagttacctcatttcaactgtgatagattagtacaa
aagtatggatataaaaaagatttagattatgtgttttacttaagagagttaagaccaagt
atagcttctaagttagtaatattagaacaagttcaaataaaagataatagcaataaagat
gaaataacaaacaagcaagtgaagaaggtgttcaaaattgctttaaattcctttgaagtg
aaggaattagcttgcagctgtatttgtttcctagaaatgattaacgtaccatcggataaa
ctaaaaatttatttgaatgttgttgaaattcttcatgaatctggatatgattctgagcaa
tgcaaggagatgtttcaatatcatttagaacaaaattatttcgaaaatattgaggaacta
ttggaaactacagttttgtttggaattgatttcaattttcaaagtggacaagatttcatt
actgccaaggaaaaatatgatatcgttatcaaatttggcagagttaataactcaaaacta
cctgaaggtttcctcaaaaattgtgcaatggcgaacgattggttatcgttcatgttattc
gctcagatctattgttacccagctgaccaaatcaaagaagtatgtcagtgcttcaaaaac
cctttttatttggaacatattttacactgtgttacctacgatatacaagtagaggaagag
aatgcactgatgaagggaagggactcacgaaaggcattcctctcgagaattggtgtaaga
ttgagcagtgatccttccggtccctacgatatatattcactgaagacccaatcggttacc
aggagtgattcgttagatgttttggagatcgatattttgaataccaaagcgacgttgttg
cagactcttattaggtgccataatagtgtcgatcctcccaaggctctccttcaagcttgt
catatgtacagacatcccatcttagctatacttgctacatgctacgagccggactcggtg
catactaactggttgacgtggttggtggtttcctgtgatctacataggacctatatgaat
gttgagcacattgttacattggcaggcaccaccatggaagttctgaataaagctatggag
aatagatttccagctacattattacaaagttttcaaatattctttcctaataatggtttg
aagcatttcctcaagtttctacatctgggtattcagcatatattcgacctagacttgatg
tccaacgaattaacagccttcaaaaaatccctgaaaatttgcagaaagtcaagcatcctc
ccggaattcgacagagaaatcacatacctgagaaacagattctggatagaagagaccgct
cttaccctgatggcttcagctctagaatacaactttaggtctacatacgaccagatagct
ttcctcaaagtaataaaggcactcgaagtccaagaaatgttctgtatcgaagtaccctcg
ttctactccattttgaacatactgacagccttgtatgaggatggcagtaacattcgcctg
gatttgagcagggccctcagcctcgtccaccatagggaagctgtgataaagtgccaaaac
gaccttcttcaccagaaaaacttcagcactgctttgaaagtggcccagatagggaatttg
ccttgcgatttggtgatcttgatggaatgggaggataaacttgataacagggtggaagat
aagagtttctggtcagattgtaacgagtctttcaaatttcatggagttacagccgatagg
gtcgttgagttttactccaactcgacggataagataaccgacgaactagtaaagtttgag
gtgtccaaattggcatatcagtgggctagggagttccagttgtccttccagtacgatctg
gagaaagctatggtcttaaattatatcaaactggaagagaaacataagaaccccgatttg
ttggacgttcacgctgaaactcacctttacaaggatatcttgagcaaaatggaacaactt
ccagcgaaggacagctttgcagacaaggattctgagtataaagtttccgatctggtttcg
ctggcattggagaaaggtaactttttcttcgctctgagactggaaaggatgtttccctgc
aaatgcgtcgatttggatgttttgaagttgtgcttcagtctggcggaaggtttgctgacg
cccagtcagctaagtatgaaggataagacgttgctcaataagaattcgaattttaagagt
tacagttcaagcagaaggacgttgttttccagtaggctttctggattgaacacgattgtc
ccttatcagtattcatcgtcacctgtcatcaatacggattcaaatctagaaggaggaagg
gaagaaattctgagtatactcagaactctttctgagaaattagtaagtggatcgcaaata
ggttcgaaaataatacaaacatatcaagtgagtctaatgctccaagtaccatattacacg
gttcttagcaaccccgatgcgggtttcttgaaaaaatcactggaaaaagattgttcgacc
aaactggaattagttcacgatttcgtttcaattcacaaatggagcaaagtacaggtatct
gatttgatctgcgaacaactggtaaaccatttacagaactatgttgaaacaaaggccgat
aagcctatgatgtgggacttgaaccttaacacccacttccactacattttacgcctcttc
caacgggactgttccatactgggtcgaaagatattcaactacgcacaagtccttttcaga
tctcacatgacttccacccacgaaatcagaatgaacgaattgaccttcatagtcgagctt
ataataaaggccaacgactgcttcacttcggactgcaacatgcaagggatatccaacgtt
ttgaaccaatgcaagacgatggtcatgcatttggtgactttgagaagttggaagttgata
gtaaggttgctgacaggcatcgctaggtatactgagatgaactacatcttccaaattctg
aaggacaacgatcagtttgagtatttactgatgaagggctcgaatcgggaaaactccctg
aaaatagccttgttggcttatttgaagaagaattgccccatggagaaggacctgtacaaa
atggtcgccctgcactttgccatgttctctgaagtcgccctcttgtgggagaacgatgca
ataggcgtgatcaagaacctaatcggtatttctaagctggaaatgcagaataataagata
aatccagataccgagccttatgttttatttacaaatactgagggaacaagattgtgtttg
tcaaaggctatggaaaattatacgtacgctactgagttttaccttcaaggtgaaaaattg
atgaaggctatgcataccgcaaaacaggccgaacttatagctatgcagttgtcgttgttc
aaaggtttgtcttcgtctgatactgcagtatgcgttcttgatctggaggaaagtcaaatt
gtcaatctgatttcttctcaattgggttttgaacagtcgttaattgtggccgaagcttat
gaatattcaccagattgggcagcggtattgttgaagcagtgcgttctccaaaacaatacc
aattatctggaacaatttctgaatcatctccctttgacggaaaccctcatcagggagata
tcacgtcgtttcatctctatttatgccaccatcacgccagagggcgtgcagaacatgaag
gagattttgaataaactgccctcggtgcatgccaaatatcaaatagctagcgaattgagt
ttccacgatgtagtagaggatttgttgaacaccggacagctatgttacttgaaagataca
gtttggaaaagaggttatagaaattcatag
DBGET
integrated database retrieval system
