Harmonia axyridis (harlequin ladybird): 123681604
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Entry
123681604 CDS
T10650
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
haxr Harmonia axyridis (harlequin ladybird)
Pathway
haxr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
haxr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123681604
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haxr03019
]
123681604
03012 Translation factors [BR:
haxr03012
]
123681604
Enzymes [BR:
haxr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123681604
Messenger RNA biogenesis [BR:
haxr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
123681604
Translation factors [BR:
haxr03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
123681604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
HA2_N
OB_NTP_bind
HA2_C
AAA_22
nSTAND3
AAA_19
ATPase
AAA_7
NACHT
Rad17
AAA_23
Sigma54_activat
PhoH
ABC_tran
TsaE
Motif
Other DBs
NCBI-GeneID:
123681604
NCBI-ProteinID:
XP_045475752
LinkDB
All DBs
Position
6:32456620..32462766
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AA seq
914 aa
AA seq
DB search
MYKWKRKIQHQSYQDNDRHSDFKLPKVFQNAGNAKTRAEDYSFHIFVRSSMLASSMERNS
IGKIQISPAKLIEINNLLKHLPPIEDVPYERMVNSLFKVHFLEKRTITLDQKQDFFLEKL
ERKSDIDHELFSTYNKRYEDREFLAMYEKRKRLPSFEKRNQIVNMVKSNQVVLISGETGC
GKTTQVPQFLLDEYISSYQGSLCKIICTQPRRISAISVAERVAAERGEDLGISVGYQIRL
DRILPRKYGSILFVTTGIIIRLMESDPSLNTISHLIIDEIHERDIHSDFLLTLVKQLIVK
RTDLKVILMSATLNEKQFKEYFDKCCHVEIKGLSHHVEDYYLEDILNRLNYFFPSSASRT
ESMERNTMIFQTKVKPYISDVLEGRYPYAVCRELKKPHSEELNIDLIFKLAVDISRNERE
GSILIFVTGYDDINKLFNRFYDLPEDDFFVVALHSEIEMENQIRVFEPSPPGVRKIIIST
NIAETSITIDDVVYVIDSGWAKIKVYDPKTNTENLQPRFISKANAIQRKGRAGRLREGKC
FHLYTKARFENFYEFQRPEILRCRLESLMLQMKFLQLGKVTSFFNKMIDHPDSTTVAASL
KLLNALGALDEEESLTPLGFYLAKLPIAPQLGKMLLLGVFFNCLEPIMNISVCLDYKSPF
NLVLRRNNQSRELDPRIIEFAEGIKSDHLLLHKAVFLYQKFDKRTRQQYCEKYNINSTVL
DMLKKLKVEFMENLLSLELVQTTDSNFKELNTNSTNIELVKSIVSAGLYPNLLLACTISG
QPKVLFKTLDDTKVVLHKKSILSCDRFFSCPLLAYYNKLKTNLDMVFDVTVCSPLPVIFF
GDKFRIEKTMHDNYINVNKLRFTCDKNTSSIIEQLRAHLEHYILFRLTQPGLMLPANTDK
FLKIMVDILASPEV
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgtataaatggaaaaggaagatacagcaccaaagctatcaagataatgatcgccattca
gatttcaaactgcccaaagtatttcaaaacgcaggaaatgccaaaacaagagcagaagat
tattctttccatatatttgtacgttcctcaatgctggcatcatctatggaaagaaattca
attggaaaaattcaaatatctccagcaaagctaattgaaatcaataatttattgaagcat
cttccacctatagaggatgttccatatgagaggatggttaattccttgtttaaagtccat
tttcttgaaaaacgtacgattacattggaccagaaacaggatttctttttagaaaaatta
gaaaggaaatctgatatagatcatgaattattttccacatataataaacgatatgaagat
cgagagtttttagcgatgtatgaaaaacgtaaaagattgccatcatttgaaaaaagaaac
caaatagttaatatggtgaagagcaatcaagtagttcttataagtggagagacaggctgt
ggcaaaactactcaagtccctcagtttttgcttgatgaatacatcagttcttatcaggga
tctctgtgtaaaataatctgtacccagcctaggagaataagtgccatttctgttgctgaa
agagtggctgcagaaagaggagaagatctagggataagtgttggttatcaaattcgtttg
gataggatccttccccgtaaatatggttctattctttttgttacaactggtatcatcata
agactgatggaatctgacccatcactcaacactatttcacatttgataattgatgaaatt
cacgaaagagatatacactcagattttctactcaccttggtgaaacaacttatagtgaag
agaacagatctgaaagtaatacttatgagtgcaactttgaatgagaagcaattcaaggaa
tattttgataagtgctgtcatgtagaaatcaagggtctctctcatcatgtcgaggactat
tatttggaagatattttaaatagattgaattatttttttccatctagtgcttcaagaaca
gagagtatggaacgaaacactatgatatttcagactaaagtcaagccttatataagtgat
gtattagaaggccgttatccatatgcagtgtgtagagaacttaagaaaccacatagtgaa
gagctaaacattgatttaatctttaaactggcagtggatatcagtcgaaatgaaagagaa
ggctctatattaatttttgttactggctacgatgatataaacaaattatttaaccgtttc
tatgatttacctgaagacgatttctttgttgtagccttgcattccgaaatagaaatggaa
aatcaaataagagtattcgaaccatcaccacctggagtacgaaaaataataatttcaaca
aacattgcagaaacatctatcacaattgatgacgtggtgtatgttatagattcaggatgg
gcaaaaataaaggtatacgatcctaagacgaacactgaaaatttacaaccgagattcatc
tcaaaagctaatgctattcaaagaaaaggtagagccggtcgtttgagagaaggaaaatgt
tttcatctctacactaaagcgcggtttgaaaatttctacgagtttcagcggccagagata
ttgaggtgcaggctggaaagtttaatgttgcagatgaaattccttcagctggggaaggtt
acaagttttttcaataaaatgatcgatcatccagatagtactacggttgcagcatctttg
aaattattgaatgcgctcggtgctttggatgaagaagaaagcttgacgcctttgggattc
tacttggcgaagcttccaatcgctccccaacttggaaaaatgttgttacttggagtattc
ttcaattgtttggaacctataatgaatatttctgtatgtttggattacaaaagtcctttc
aatctagttttgagaagaaataaccagtcgcgtgaacttgatccaaggataatcgagttt
gctgaaggcattaaaagcgatcacttattgttgcataaggcagttttcctctatcagaaa
tttgataaaagaacaagacagcaatattgcgaaaaatataatattaattccaccgttctg
gatatgctaaaaaaattgaaggttgaatttatggaaaatctactgtcgttggaacttgtg
caaacaactgattcaaactttaaagagttaaatactaattctacaaatattgagttggtg
aaatcaattgtttctgcaggtctatatccaaatctacttcttgcctgtacaatatcagga
cagccaaaagtgttgttcaaaacattggatgatactaaggtcgttcttcataagaaatcg
attctgtcatgcgacagattcttttcatgtcctttacttgcatactataacaagttaaaa
actaatctggatatggtatttgatgtcacagtatgttcccctttacctgtgatatttttt
ggagataagtttcgaattgaaaagactatgcatgataattacatcaatgttaacaaactg
aggttcacctgtgataagaacacttcaagtattatcgaacaactgagagctcatcttgaa
cactacattttgtttcggttaacacaacctggattaatgttgccagccaataccgacaaa
tttctgaaaatcatggttgatatattggcaagtccagaagtataa
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