Harmonia axyridis (harlequin ladybird): 123681761
Help
Entry
123681761 CDS
T10650
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
haxr Harmonia axyridis (harlequin ladybird)
Brite
KEGG Orthology (KO) [BR:
haxr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haxr03021
]
123681761
03036 Chromosome and associated proteins [BR:
haxr03036
]
123681761
Transcription machinery [BR:
haxr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
123681761
Chromosome and associated proteins [BR:
haxr03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
123681761
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
SH2
Tex_central_region
S1
HHH_9
Spt6_S1
Tex_YqgF
HHH_3
Tex_N
OB_RRP5_4th
MJ1567
Motif
Other DBs
NCBI-GeneID:
123681761
NCBI-ProteinID:
XP_045475998
LinkDB
All DBs
Position
6:31441306..31450592
Genome browser
AA seq
1767 aa
AA seq
DB search
MSAFIDSEAEESSEEEVESPDKKRPKKMEDSSEEEEDDEDKIREELRDLIDDGPVEESDG
EDSDASHGTKRKKSDDEELDDRLEDDDFDLIEENLGVKVDRRKFKRLKRIEDEGSEEEDK
DEGQEREAIAMDLFSDDDDEKRSERSQRQVPDTEQYGDEEEEGGYSDDDDDGFIVDDDGR
PIGDKKKKKKPIFTDAALQEAQETFGVDFDYDEFSKYDQEEYDEDEEDEEEEDEYEEDGE
KRRKTKTTRKKTTKKSIFEVYEPSELKRGFFTDMDNQIRNTDIPERMQLREVPITAVPED
SKELDEEAEWIYKQAFLKPTISIMDANLTAEARERQKKGPQTIAKIKKALDFMRNQQLEV
PFIAFYRKEYVQPELNINDLWKVYKYDGKWCQLKSRKENLTLLFEKMRSYQLDLIMKDPD
APIPDNVRVMKDSDFERLKSIQTPEELQDVYNHFSLYYANDIPVMQAAWRAKERQRKKEE
KKQARLKAIAESEEGSELPPEVEDDEEDEPEPETLKAANRNGSYTLCSKAGLDGLAKRFG
LTPEHFAENLRDNYQRHEVDQEAIEPSDLAAEYICPSFSTVEEVLQAAKFMVTRQLGREP
LVRKCVREVFFERAKICVQPTKKGLKMIDETHNCYSMKYVKDKPVRDLTGDQFLKLCLAE
EENLLTITINENFEGNTTNSFIDEVKQLYLKDEFSKNVQDWNDLRSECVEHALKKCVLPD
LRNELKRALLAEAKEFVLKACCRKLYNWIKIAPYTVSFPDEDEDEWDTSRGVRVMSVAYV
PDYSQAAFACIAATDGDITEYLRLPHLTKRKNSWRVEEKLMKESDLTAIRNFIMTKKPHV
VCIGGESREALMIADDIKAVIADLVENEQFPTIKVEIIDNQLAKIYANSNKGVNDFRDYP
ELLRQAISLARQMQDPLVEYSQLCNGDEEILSLRLHSLQDQIDKDVLLEAINLEFVNRTN
EVGVNVNIAVQYAHKSNLLQFICGLGARKGAALLRILKQTNQRLENRTQLVTACHMGPKV
FINCSGFIKIDTNSLGDSTEAYVEILDGSRVHPETYEWARKMAVDALEYDDDEGTNPAGA
LEEILEAPERLKDLDLDAFAEELERQGFGNKSITLYDIRAELNCRYKDLRTPFRSANAEE
LFDILTKETPETFYIGKMVTAKVIGIARRKPKGEQLDQANPVRNDDTGLWQCPFCLKNDF
PELSDVWNHFDAGSCPGQATGIKLALDNGISGYIYIKNISDKQVANPEDRVKIGQLIHCR
IMKIDVERYSVDCTSKSSDLLDKNHEWRPPRDPYYDQDKENSDLKAETESKANKQRQTYI
KRVIVHPSFHNISFMEAEKCMANMDQGEVIVRPSSKGADHLTITWKVTDGIYQHIDIKEE
GKTNAFTLGKTLIIGGEEFEDLDEIIARHITPMASYARDLLYFKYYKDMNGGQKDKAEEF
IKDERKKNPSKIHYVISASKTCPGKFLLSYMPRNKCRHEFISVTPDGFKFRQQMFDNIPA
LFKWFKEHFRDPIPGGATPGTPRGSARSYSAGGATPSFNNMSSEAIQRVAQNLPSHMMQT
LSAVASQTPHYPHTPGGAYGANYINTPYTPSGQTPFMTPYGTPHTQQTPRYGQQTPSQPH
MNGPFLHPGSITPAQRTPLYRAPGSQPIPSPVSPQESPSNHSTRSSSSYNPYAMNTHRNE
AQDWKSAAAAWAARSAGRNASSGTPRSDISRSTPRSVGNTKSPRFEDLRDRRSIGKSPRS
VRSTPRTNTSPHSMSLGDATPLYDENI
NT seq
5304 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcatttattgattcagaagctgaagaaagcagtgaggaggaggtagagtcccca
gataaaaaacgtccaaaaaaaatggaagatagttctgaagaagaggaagatgatgaagat
aaaataagggaagaactacgagaccttattgatgatggtcctgttgaagaaagtgatggt
gaagattcagatgcttctcatggtacaaaaagaaaaaaatcagatgatgaagaattagat
gatcgacttgaagatgatgattttgacctcattgaagaaaatttaggtgttaaagttgac
cgaaggaaattcaaacgtctgaaaagaattgaagatgagggtagtgaagaagaggataaa
gatgaaggtcaagaaagggaagcaattgccatggatttgttctcagatgatgacgatgag
aaaagatctgagcgaagccagcggcaagttcctgatacggaacaatatggagacgaggaa
gaagaaggtggatattctgatgatgatgatgatggtttcatagttgatgatgatggacgt
cctattggtgacaaaaagaagaagaaaaaaccaattttcactgatgctgctctacaagag
gctcaagaaacttttggtgtcgattttgactatgatgaattttccaaatacgatcaagag
gaatacgatgaagatgaagaggacgaagaagaggaagacgagtatgaagaagatggggaa
aagaggagaaaaacaaaaactacccggaagaagaccactaaaaaatctatctttgaggtt
tatgaacccagtgaactcaaaagaggatttttcactgacatggataaccagatacgtaac
accgatatacctgagagaatgcagttacgtgaggtcccaattacagctgttccggaagat
tctaaagaactcgacgaagaagcggaatggatatacaaacaggcattcttaaaacctacc
atctctatcatggatgccaacttaacggctgaagcgagagaaagacaaaagaaaggacca
caaacaatagctaaaatcaagaaagctttggacttcatgagaaaccaacaactggaggtc
cctttcattgctttctatcgtaaggagtatgtgcagcctgaactaaatatcaatgacttg
tggaaagtttacaagtatgatggtaagtggtgtcaactgaagagccgtaaagaaaatctt
actcttctattcgaaaaaatgcgttcttaccaactggaccttataatgaaagatcctgat
gcacccataccggacaatgttagagtaatgaaggactccgattttgaaagactgaaaagt
atacaaacgcctgaggaactccaggatgtttacaaccacttctcgttgtactacgccaac
gatattccggtcatgcaggctgcttggagagctaaagagagacagaggaagaaggaagag
aagaaacaggccaggctcaaggccatcgctgaaagcgaagaaggcagtgaactaccgcca
gaagttgaagacgatgaggaggatgagcctgaacctgaaactctcaaagctgccaacagg
aatgggtcttatactctatgctcaaaagccggtttagatggattggcaaaacgatttggt
ttgacgccggaacattttgctgagaatttgcgagataattatcagcgacacgaggtagat
caagaagccatagaacccagtgacttagccgcagaatacatctgcccctcattttctacg
gtggaagaagtgctacaagctgctaaattcatggtgactcgtcaactaggcagagaaccc
ttagtgagaaaatgtgtacgggaagttttcttcgaaagagccaaaatatgcgtacaaccg
acgaagaaaggcctcaaaatgatcgacgaaacccacaattgctacagtatgaagtacgtg
aaagataaaccggtaagagatctaaccggcgatcagttcttgaaactctgtcttgccgaa
gaagaaaacctcctcaccataacgatcaacgaaaatttcgagggtaacaccaccaattcc
ttcatagacgaggtcaaacagctgtacctcaaggatgaattcagtaagaacgtccaggat
tggaacgacttgagatccgaatgcgtggagcacgctttgaagaaatgcgttcttcccgat
ctcagaaacgaactgaagagagctttattggccgaggcgaaggaattcgttttgaaggct
tgctgtaggaagttgtacaattggatcaagattgctccgtacaccgtcagtttccccgac
gaggacgaagatgaatgggatacttccagaggtgttagggttatgagtgttgcttacgtt
cctgactattcccaagctgcttttgcctgtatcgcagccactgacggtgacataacagaa
tatttgagactgccgcatttgacgaagagaaagaacagttggagggtcgaagagaagttg
atgaaagaaagcgacttgacagcgattagaaacttcataatgaccaagaagccacacgtc
gtttgtatcggtggcgaatcgagggaggcgctaatgattgcagatgacatcaaagcggtc
attgccgatttggtggaaaacgaacagtttcccaccatcaaggtggagataatcgacaat
caactggccaaaatatatgccaattccaataagggcgtaaatgatttcagagactacccc
gaactactacgacaagcgatatctttggcaagacaaatgcaggatcccctagttgagtat
tcccagttgtgtaacggagatgaagaaattttgagtttgaggttgcattctctacaagat
cagatcgataaagacgttctcttggaagccatcaacctggagttcgtcaatagaactaat
gaagtgggagttaacgtcaatatagcggtccaatatgcccataagagcaatcttcttcag
ttcatatgcggtcttggcgctcgtaaaggtgctgccctcttgagaatactcaaacagacc
aaccagcgtctggaaaataggactcagcttgtcacggcatgtcacatgggtcctaaagtt
ttcatcaattgctccggtttcataaaaatcgataccaacagcttaggggacagtacggag
gcctatgtggaaattttggatggaagtcgagttcaccctgaaacctacgagtgggcgaga
aagatggctgttgatgctttggaatacgatgacgacgaaggaaccaaccccgcaggagct
ttagaagagatcctggaagctcccgaaagactgaaagatctcgatttggatgcgttcgcc
gaagagttggaaagacagggattcggtaacaagagcatcaccctgtatgatatcagggcc
gaattgaactgtagatataaagacctaagaacaccgttcagatcggcgaatgccgaagaa
cttttcgatattctaaccaaagaaaccccagagactttctacatcggtaaaatggtcacg
gccaaagttattggaatagccagaaggaagcccaaaggcgaacagttagatcaggcgaat
cctgtaagaaatgacgacacgggcttatggcagtgtcccttctgtctgaagaacgatttt
cccgaactgtccgacgtatggaaccatttcgacgcgggttcctgtcctggtcaggccacg
ggtatcaagcttgctttggataacggaatatccggatacatttatatcaaaaatatcagt
gataaacaggtagctaacccagaagaccgagtgaaaattggtcagttgatacattgtaga
attatgaaaatcgatgtcgaaaggtatagtgttgattgtacctcaaagtctagcgattta
ctcgataaaaaccatgaatggagaccacccagagacccttactacgatcaagacaaggaa
aatagcgacttgaaggccgaaaccgagtccaaagctaacaaacagagacaaacctacatc
aagagagttatagtccacccgtctttccacaacatttcctttatggaagctgaaaaatgc
atggccaacatggatcaaggagaggtcatcgttcgtccatccagtaaaggtgccgatcat
ctaaccattacttggaaagtgacggatggtatttaccaacacatagatataaaggaagaa
ggcaaaaccaacgctttcaccttgggaaaaacgcttataatcggtggtgaagagttcgaa
gacttggatgaaataatagcgaggcatattactccaatggcctcttatgcaagagatctg
ctctacttcaagtactacaaagacatgaatggcggtcagaaagataaagcagaggaattc
atcaaggatgagagaaagaagaacccctccaaaattcattacgtaataagcgcttccaag
acctgtcctggaaaattcctgctttcctacatgccccgtaataaatgcaggcacgaattc
atctcggtcaccccagacggtttcaagttcagacagcaaatgttcgacaacatacctgct
ttgttcaagtggttcaaagagcatttcagggacccgatacctggaggagccactcctggc
actcctagaggttcagctcgctcctacagtgcaggcggtgctacgccaagcttcaacaat
atgagttccgaagcgatacagagagtagcccaaaacctgccaagtcacatgatgcaaact
ttatcagctgttgcgagtcaaaccccacattatcctcatactcctgggggagcttatggt
gccaattatatcaatacgccatacactccaagtggtcaaacaccgttcatgaccccatat
ggcacgcctcatactcaacagactccacgctacggtcagcaaactcccagtcaacctcat
atgaacggaccattcctacatccaggctctataacaccagcccaacgtacgccactgtac
agggctccagggagccaacccataccatcaccagttagtccacaggaatctccttcgaac
cattccactaggtcctcatcaagctacaatccttacgcgatgaacacacatagaaatgaa
gctcaagactggaagagtgcagcagctgcatgggctgctagatcggcgggaaggaatgca
tcttcaggaacgccaaggtcagatataagtcgtagtacacctagatccgtgggcaacaca
aaatcgccaaggtttgaggatctgagagataggagaagcataggaaaaagtcctaggtcg
gtcagatctactccaaggacaaacacttccccgcattccatgtctttaggtgacgcaacg
cctctgtacgatgaaaatatatag
DBGET
integrated database retrieval system
