Harmonia axyridis (harlequin ladybird): 123681877
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Entry
123681877 CDS
T10650
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
haxr Harmonia axyridis (harlequin ladybird)
Pathway
haxr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
haxr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123681877
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
haxr03041
]
123681877
Enzymes [BR:
haxr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123681877
Spliceosome [BR:
haxr03041
]
Complex A
U2 snRNP components
U2 related factors
123681877
Complex B
123681877
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
CdAMP_rec
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
123681877
NCBI-ProteinID:
XP_045476170
LinkDB
All DBs
Position
6:38117928..38123917
Genome browser
AA seq
1016 aa
AA seq
DB search
MVRGRDRSRSRSPDRKRRRSRSRSKDRAKSSRYRRSRSRDRERNDRRSRSRDRRSRSRER
RERERRSYSRDRDRRRGDSRDRKRRREKTRSRSPEKKPKVDESGLSFDPTNLDKEEEQKK
LELEMQKRRERIERWRAERKKKEQEATKKEAQKGTLVSNLTIPQGTTKKWSLEDDSEDED
KVDKNEKEENEEEKEKDEEEPEKVPEAPAEDEVDPLDEYMKEVQAEVRSINRLHVKKPEK
SDANTTKKGNLVIVTGIAKSKVDTRKGELVEQNQDGLEYSSEEEQEDLKDTAANIANKQR
KDLAKIDHNNIIYIPFRKNFYVEVPEISKMTSQEVDAYKEELEGIRVKGKGCPKPIKTWA
QCGVSTKELNILRKLGYEKPTPIQVQAIPAIMSGRDLIGIAKTGSGKTLAFLLPMFRHIL
DQPPLEETDGPIAIIMTPTRELCMQIGKDIKKFTKSLNLHAVCVYGGTGISEQIAELKRG
AEIIVCTPGRMIDMLAANSGKVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQ
TVMFSATFPRQMEALARRILQKPIEVQVGGRSVVCKDVEQNVVIIEEDQKFLKLLELLGL
YQEHGSIIVFVDKQENADILLKELMKMAYNCLSLHGGIDQFDRDSTIIDFKSGKVKLLIA
TSVAARGLDVKQLILVINYDCPNHYEDYVHRCGRTGRAGNKGFAYTFITPEQSRYAGDII
RAFELASVTVPEQLRTLWESYKSKQEAEGKKVHTGGGFSGKGFKFDENEAAAVNEKKKFQ
KAALGLVDSDDEDLEHDIDQQIESMFATKRTVKEIKAPLGIVNPALAGVSTAVDKLELAK
RLASKINFTKTVPMDAKFATQEAAASILKGSSNALSITAKTVAEQLAAKLNTKLNYQPKD
DDERDAEDSEQTFRKYEEELEINDFPQQARWRVTSKEALAQISEYSEAGITVRGTYVPNG
KQPPEGERKLYLAIESTSDMAVAKAKSEITRLIKEELLKLQTSGHHSFNKARYKVI
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atggttaggggacgtgatagaagtaggagtagatctcctgatcgaaaacgtaggagatca
agatccagaagtaaagacagggccaaatcaagtcggtatagaaggagcagatcaagggat
agggaacgaaatgacagacgaagtagaagtcgagatagaagaagtagatcaagagagaga
cgggaaagagaacgacgctcttatagtagagatagagatcgtagaagaggagatagcaga
gataggaaaagaaggagggagaaaactcgcagtcgatcccctgaaaaaaaacctaaagta
gatgaatcagggttatcatttgatccaacaaatttggacaaagaggaagagcagaaaaaa
ttggaattggaaatgcaaaaacgtagggaaagaatagaaagatggagggctgaaaggaaa
aagaaagaacaagaagctacgaaaaaagaggcacaaaaaggaactttagtatctaatttg
acaatacctcaaggtacaactaaaaagtggtctcttgaagatgattctgaggatgaagat
aaggtggataaaaacgaaaaggaagaaaatgaggaagagaaagaaaaagatgaggaggaa
ccagaaaaggtacctgaagcccctgcagaagatgaagttgatcctctagatgagtatatg
aaagaggtccaggctgaagtacgcagtataaatcgtttacatgtcaaaaaaccagaaaaa
tcagatgctaacactaccaaaaaaggtaatctggtcatagttacgggtatagcaaaatcg
aaagtagacacaaggaaaggagagctggtcgagcaaaatcaagatggccttgaatactca
tcagaagaagaacaggaagatttgaaagataccgcagccaacatagccaataaacaaaga
aaggacctggccaaaattgaccacaataatataatctatattccctttaggaagaacttt
tatgttgaagtaccggaaataagcaagatgacttcacaagaagttgatgcctacaaggaa
gaattagaaggaattagagtaaaaggaaaaggatgtccaaaaccaataaaaacatgggcc
cagtgtggagtatcgaccaaagagctgaacatattaaggaaactcggctatgagaagcct
acaccaattcaggtccaggcaataccagccataatgtctggaagggaccttatcggtata
gcaaaaacaggaagcggtaaaacccttgccttcctacttccgatgttcaggcatatattg
gatcagccccctttggaggaaaccgacggccccatagctataattatgacacctaccaga
gagctatgcatgcagatcggcaaagacataaagaagttcacgaaaagtttgaacttgcat
gcggtgtgcgtctatgggggcaccggtatttcggaacagattgcagaacttaagaggggt
gcggaaatcatcgtttgcacgcctggtaggatgatcgatatgttggcagccaatagtggg
aaagttacaaacctaaggagggtaacttatatcgttttggatgaggctgacagaatgttc
gacatgggtttcgagccccaggtgatgcgaataatagacaatgttcgaccggataggcag
accgtaatgtttagtgccacgtttccccgtcagatggaggccctggcccgtaggattctg
cagaaaccaatagaggtgcaggtgggaggtcgatccgtggtttgtaaggacgtagagcag
aacgtggtcattatagaggaggatcagaagttcctcaagctcttggaactgctgggattg
tatcaagagcatggaagcataatcgtgtttgtcgacaaacaggagaatgcagatattcta
ttgaaggagcttatgaaaatggcatataactgtttgagcttgcatggtggcattgaccag
tttgacagggattctacaatcatcgatttcaagtcaggtaaagtgaagctcctcatcgca
acatcggtggctgctaggggactggacgttaaacaactgatcctcgtaatcaactacgat
tgtccaaaccactacgaagactacgttcatcgatgtggaaggacaggtagggcaggtaac
aaaggattcgcctacaccttcataacccccgaacagtctaggtatgccggagacataata
agagctttcgagttggcttcggttaccgttcctgaacagcttagaaccctttgggaatcg
tacaagagcaagcaggaagcagagggtaaaaaggtccatactggtggtggtttcagtggt
aaaggtttcaagttcgacgaaaacgaggcggcagctgtgaatgagaaaaagaagttccag
aaagcagccctcggtttggtcgactctgatgacgaggacttggaacacgatatagaccaa
cagatagagagcatgtttgctacaaaacgaacagtgaaggagattaaggctccattgggc
atagtcaacccagcattggctggagtgagcacagcagtcgataagctggagctggccaag
agattggcctcgaagatcaacttcaccaaaactgttcccatggatgccaaattcgcgact
caagaagcagcagcctcgatactcaaaggaagtagtaacgccttatcgataacggctaag
actgtagctgagcagttagcggccaagctcaacaccaaattgaactatcaaccgaaggat
gacgatgagcgcgatgcagaagattccgagcaaaccttcaggaagtacgaggaagagttg
gagatcaatgatttcccacaacaagcccgatggagggtaacttccaaggaggccctagca
caaatttccgaatattcggaagcaggcatcacagttcgtggtacttatgttcctaacgga
aaacaaccaccggaaggagagagaaagctgtacttagcaatcgaaagtacctcagatatg
gcagtggccaaagcgaaatctgaaataacacgtctcatcaaagaagaactgctcaaattg
caaacatctggacaccacagtttcaacaaggctagatacaaggttatttag
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