Harmonia axyridis (harlequin ladybird): 123681937
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Entry
123681937 CDS
T10650
Name
(RefSeq) THO complex subunit 5 homolog B
KO
K13174
THO complex subunit 5
Organism
haxr Harmonia axyridis (harlequin ladybird)
Pathway
haxr03013
Nucleocytoplasmic transport
haxr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
haxr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123681937
09122 Translation
03013 Nucleocytoplasmic transport
123681937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haxr03019
]
123681937
03041 Spliceosome [BR:
haxr03041
]
123681937
Messenger RNA biogenesis [BR:
haxr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
123681937
Spliceosome [BR:
haxr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
123681937
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
123681937
NCBI-ProteinID:
XP_045476271
LinkDB
All DBs
Position
6:complement(17861164..17867356)
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AA seq
685 aa
AA seq
DB search
MVKDSTRDSSKKRRKVVSSTDPENEADVYKKAVDFEEKEALGRSADDDAELYMEISQDIR
KLLTEIFQLKTQKPPDMMEQVTKKCREACVKVAILKKLNRMEKVRVVKAREMLSTEKQKV
DSINLQYQNLLYEANHLISEFNKCFQFKSKDEDIELIGIEEFMKEAPEATTKEFKNVDEN
DESKKHALRLARLEYELEQRKNLAKLCKTLEEEKKKIGLDIIEHKKKLDGLAPKLGAVLE
VTKPLQEYLDIPIDKLRAEHKLAYLLPEPLYLFYVNVEGFKEVYDQSITIAIVGDHDEAT
QWKEQQASARLQDEEDTEPEIEQDSEEVIEVKKRRHRKSSSKPQDPKEEKKRKVLQTHPL
SVEVTMNMKQSLSIKLKLNYYYNLKIVTIKSEVILPNNITGNTAKEVLMGETLLGELVEG
DTGLESPNSTMSHQLKKFSLGPYETLIPDIGFAYGWAQKACGLDFLSQQTSREHSQKLSI
LNVEFVMKTLHSKLQSRYALALQLELLEKNQIPCIPDNLELPKNMISSLTKWVSKSYQQF
CQSPGTSALIEEEIVKPNDIFYCATITRDNASMECFIVIKNEFPLQPPIFSLTMNYGGKK
HAGNSDDIRDMERSLNTVWSVTYSAAEWILAAQITLACCYLDIYLETKHSDVFPQNSIFF
RSVCARNRRKPFHYRKIGSGVYTQY
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggttaaagactctacaagagatagctctaaaaaaagacggaaagttgtttccagcacc
gaccctgaaaatgaagccgatgtttataagaaagctgtcgatttcgaggaaaaagaagct
ttgggcagatccgctgacgatgatgctgaactatacatggaaataagtcaggatatccga
aaacttttaactgaaatatttcaattgaaaactcagaaacctccagatatgatggaacaa
gtaactaaaaaatgcagggaggcatgtgttaaagtggcaattttaaaaaaattgaatcga
atggaaaaagtgcgtgttgttaaagcaagggaaatgttatcaacagaaaaacaaaaggtt
gattcaattaacttacaataccaaaatcttctatatgaagccaatcatttgatttctgag
ttcaacaaatgttttcagttcaaatctaaagacgaagatattgaactcatcggcatagag
gaattcatgaaagaagcaccagaagctaccacaaaagaatttaaaaatgtggatgaaaat
gatgaaagtaaaaaacatgctttgagactggccagattagaatatgaattggaacaaaga
aaaaaccttgccaaactttgcaaaacattggaggaagaaaagaagaaaattggtttggat
ataattgaacacaaaaagaaattggatggtttggctccaaaactaggtgctgttttagaa
gtaaccaaacctttacaagaatatcttgatatacctattgacaaattaagggccgagcac
aaacttgcttatctcttaccagaaccattgtaccttttttatgtcaatgtggaaggattc
aaagaagtatatgatcaatctattacaattgctattgttggtgaccatgacgaagctact
caatggaaagaacaacaagcctcagcaagattgcaagatgaggaagacactgagcctgag
attgaacaagattctgaagaagttatagaagtgaaaaaacgaagacatagaaaatcaagc
agtaagccacaagacccaaaggaagaaaaaaaacgaaaagtattacagacccacccgtta
tcagttgaagttacaatgaatatgaaacagtcgctatcgatcaaactcaaattgaactac
tattataacctcaaaatagtgactattaagtctgaagtaatattgccaaataatataaca
ggtaatactgccaaagaagtacttatgggagaaactctattgggagaacttgtagaagga
gatactggattagaaagtccaaactcaactatgtcccatcagttgaagaaattttcatta
ggtccatatgaaacattaataccagacattggcttcgcttacggttgggcacaaaaagca
tgtggattagattttcttagtcagcaaacctctagggagcatagccagaaattgagtatt
ctcaatgttgaatttgttatgaaaacattacatagtaaactacagtctagatatgcatta
gcacttcaacttgaattgttggaaaaaaatcaaataccctgcatacctgataaccttgaa
ttgcccaaaaatatgatatctagtctcaccaaatgggtatctaagagttatcagcagttt
tgccaatccccaggaacatctgctctgattgaagaagaaattgttaaacctaatgatata
ttttattgtgccacaattactagagataatgcttcaatggagtgttttattgttatcaaa
aatgaatttcctcttcaaccccctattttttctctgacaatgaattatggtggaaaaaaa
catgcaggaaattctgatgatataagggatatggagagaagtttgaatactgtttggtca
gtaacttattcagcagctgagtggatattggctgcccaaataacacttgcttgttgctac
ttggacatttatcttgaaacaaaacattctgatgtttttccacaaaatagcatattcttt
aggagtgtatgtgctagaaataggagaaaaccatttcactaccgaaaaataggtagtggt
gtatatacacaatattaa
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