Harmonia axyridis (harlequin ladybird): 123682035
Help
Entry
123682035 CDS
T10650
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
haxr Harmonia axyridis (harlequin ladybird)
Pathway
haxr04120
Ubiquitin mediated proteolysis
haxr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
haxr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
123682035
04120 Ubiquitin mediated proteolysis
123682035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
haxr04121
]
123682035
Enzymes [BR:
haxr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123682035
Ubiquitin system [BR:
haxr04121
]
Ubiquitin ligases (E3)
U-box type E3
123682035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
WASH-7_C
Pox_LP_H2
Motif
Other DBs
NCBI-GeneID:
123682035
NCBI-ProteinID:
XP_045476374
LinkDB
All DBs
Position
6:complement(36006571..36022841)
Genome browser
AA seq
1169 aa
AA seq
DB search
MSELNQEEIRRKRIARLAALERATTGSVSPQETPISQSPINSQREPSIEPSEEPKLIEED
KPNEEYPSNSEAPRTSDGVFQIPSKPIDVPCGARHRSRPPPQRSDSDTSSTHMEVDECIG
SSDKIGGTNTDIDSGFENMEVGWFYNTLKLHKYKYPVIPRFVDESDIRKERKRASSIELT
DDQLCNTVARILGATYRLDLKSRLYLPQTAEMLAQSQSPRISELISMSIMEVLVMIREGE
DPFQEVSMDVNTADNGECSSMKSFSASPTLNLSPSPSPVSSCPISVPPVQGGYCDENTRT
GRALNFILDSYARVGVEERNHPRKSSMPPLNSVLSELRAQLVQYASLVLQGIVIPIEAKT
INGPKSPLFKSLTDQTMPRGFLSELVASVHVNDNVMSTIFGPIMQGLFASMQEASVVDDK
LRGPIQTLLELAELRYNNRPFCTFITKQPQFMPEICTPVPGREISCTSFLAPFLSVSVFD
EDEPLIAEKFFSGNSQTDKSVNQTLQLELETTRMSVYRIFHCLLANMESRDPTLNYIAFV
LKCNEKRSQIQANEGALAGDGFMLNLQTVLQMLSMKIKLDKIDPQYPFHPETMVNIKNET
RIKYTSQEVENWLDSSKDTVKFLSPNFSTICWFLTLHCHHLSLLPALQKYQRLLKSIREL
QKLLDEKVSTEAQWKNTPQAHHNKIVIKRWKVELKKMSNSKLCAEAGLLDKNLMKRTLIF
YTSVAEYLLMLMNKDDAESQATFSALPEWYIEDIAEFLLFILQSMPSVVADNMENSMITW
LLVCICKSSMIKNPYLVAKIVEVVFVLSPSIHPRCENLHSRLMHHPLSQESLPSALMKFY
TDVETTGSSSEFYDKFSIRYHISLIIKGMWDSPVHRQALVNESRNGKQFVRFVNMLMNDT
TFLLDESLESLKRVHKIQELMSDEARWSKLSPEQQQSRTRQLAADERQCRSYLTLGRETV
DMFHYLTIDIKEPFLRPELVDRLASMLNFNLQQLCGPKCKNLKVKNPDKYGWEPRRLLSQ
LVDIYLHLDCDKFASALAGDERSFRKELFDDALVRLQRIGIKSTSELEQFQALAVKANKV
WINNQKTDDWMADAPDEFKDPLMDTLMTDPVRLPSGQVMDRAVIMRHLLNSSTDPFNRQP
LTEDMLVPALDLKERIVNWRSKKARSSSN
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaattaaaccaagaagaaatccgtagaaaacgaatagcaagattagctgctttg
gaaagagctactacaggttcagtgtctcctcaggaaactccaatctctcaatccccaata
aattcccaaagagaaccaagcatagaaccttcagaagaaccaaaactgattgaagaggat
aaaccaaacgaagaatacccctcgaacagtgaggcaccgagaaccagcgatggggtgttt
caaattcctagcaagcctatcgacgtaccttgcggcgccaggcatagatctaggcccccg
cctcaaagaagtgactcagatactagctctactcacatggaagttgacgaatgtatcggt
tcaagcgacaagattggtgggacgaacacagacatcgactccggatttgagaacatggag
gttggttggttttataacaccctgaagttgcacaagtataaatacccagtcattccacga
ttcgttgacgaaagcgacataaggaaagaaagaaagagagccagctcgatagaactgacc
gatgatcagctgtgcaacaccgtagccagaatactgggcgccacctacagattggacctg
aaatcaagactgtacctaccccaaaccgctgaaatgttagcccagtcccagagtccgaga
atttccgaattgatatccatgtcgataatggaggtgttggtcatgatcagagagggcgag
gaccccttccaagaggtctccatggatgtgaatacggcggacaacggagaatgcagcagt
atgaaatccttttctgccagtcccaccttgaatttgagcccttccccaagtcctgttagc
agttgtccgatatccgtgccccctgtccaaggtggctattgcgatgagaatacccgtaca
ggcagagctctcaatttcatcttagactcttacgcaagagtaggagtcgaggagagaaac
catcccaggaagtcaagtatgccaccactgaacagcgttctgtccgaactcagggctcaa
ttggtacaatacgccagtttggttttacagggaattgttataccgatagaagcaaaaaca
atcaatggtccaaaatcgcctctgttcaaatcgctcacggatcaaacgatgccgcgtggc
tttttatctgaacttgttgccagcgttcatgtaaacgataatgttatgtctactattttc
ggacctataatgcaaggtttatttgcgtcaatgcaagaggccagtgtggtcgacgataaa
ctcaggggacccatacaaactctgctcgaactagcagagctccgatataacaacaggcct
ttttgtactttcataacgaagcagccacagttcatgccagaaatttgtactccggtgccg
ggcagggaaataagctgtacatctttcctggcacctttcctatcggtgtctgttttcgac
gaagatgagccactcatagcagaaaaattcttctccggcaactcacagacagataaatcg
gtcaatcagacacttcagttggaattagagaccaccagaatgagtgtctacaggatcttc
cattgcttgttggcaaatatggaaagcagggatccaacccttaattatatcgcattcgtc
ctgaagtgcaacgaaaagagatctcagattcaggccaacgaaggggcgttggccggagat
ggcttcatgctgaacctccaaaccgtcctacagatgctgtcgatgaagatcaagttggat
aagatcgatccccagtatcccttccatccggaaactatggtcaacataaagaacgagacc
aggataaagtacacgtctcaggaggtggaaaattggttagatagctcaaaagataccgtc
aagttcctgtcaccaaacttctcgacaatctgttggttcctcacactccactgccaccat
ttgtccctactgccggctcttcagaagtaccagaggttgttgaagtcgatcagagagctg
cagaagctgctcgacgagaaggtgtccaccgaagcgcagtggaagaacacgcctcaagcc
caccacaacaagatcgtgataaagaggtggaaagtagaattgaaaaagatgagcaactcg
aagttgtgcgcagaggccggcttgctagataagaatctgatgaagaggaccctgattttc
tacacgtccgtggcggagtatctgctgatgctgatgaacaaggacgatgcagaaagccag
gccacgttttcagcgttgcccgagtggtacatcgaagatatagccgagtttcttctgttc
attttgcagtccatgccgtctgttgtagcggacaacatggagaattccatgatcacctgg
ctcctcgtgtgcatctgcaagtcttccatgatcaagaacccctacctcgtggccaagata
gtcgaggtggtcttcgtgctgagcccctcgatccacccgcgttgcgagaacctgcactct
cgcctgatgcaccatccgctgtctcaggaatcgctgccgagcgcgctgatgaaattctac
acagatgtcgaaacgactggatcgagctcggagttttatgataagttctcgatcaggtat
cacataagcttgatcatcaaaggaatgtgggattcccctgtccatcgacaagccctagtg
aacgaatctagaaacggcaagcagttcgtacgtttcgtaaacatgctgatgaacgacaca
accttcctacttgacgaatcgttggaaagtttgaagagggtgcataagatacaggaactg
atgagcgacgaagcgaggtggtctaagttgtcgccggaacagcaacagagcagaacgagg
caattggcagctgacgaaaggcagtgcagatcgtacctcactttggggagggaaactgtc
gacatgttccactacctcaccatcgacatcaaagagccattcctacgtcctgaactagtt
gacagattagcttcgatgctcaatttcaatcttcagcagttgtgtggaccgaaatgcaaa
aatttgaaggtcaaaaatcccgataagtacggatgggagccgagaaggctgttaagtcag
ttagttgacatttacctccatctagactgtgataaattcgcttcagccctagcgggcgac
gagagatcgttcagaaaggaactgtttgatgacgctctggtacggctacaaaggatagga
atcaagtcgaccagcgaactggagcagttccaggctttggccgtgaaggccaacaaggtc
tggataaacaatcagaagaccgacgattggatggctgacgcgccagacgaattcaaggac
cctctgatggacaccctgatgactgatcctgtccgtttgcccagcggacaagttatggac
cgggcggtcatcatgaggcatttgttgaacagcagtacggatccgttcaataggcaacct
cttacggaggatatgctggttcctgcattggacttgaaggagagaatcgtaaattggcgt
tccaagaaagccagatcgtcatcaaattaa
DBGET
integrated database retrieval system
