Harmonia axyridis (harlequin ladybird): 123682641
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Entry
123682641 CDS
T10650
Name
(RefSeq) ATP-dependent RNA helicase DDX42
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
haxr Harmonia axyridis (harlequin ladybird)
Pathway
haxr03040
Spliceosome
Brite
Enzymes [BR:
haxr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123682641
Spliceosome [BR:
haxr03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
123682641
Complex B
123682641
Complex C
U2 SnRNP specific factors
123682641
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GFIT
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NCBI-GeneID:
123682641
NCBI-ProteinID:
XP_045477342
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Position
6:28790584..28794188
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AA seq
725 aa
AA seq
DB search
MSGFNYSGFNMNKAPTTRHNAVPPPSSISGPSSSISGLSKQGYSTMNAISQNALSAAWGG
SKKRAATEDEYFEDDEEETVPDLAYIPAPDSPTRIEMEKKKQQEEEEDDPLDAYMAGIEY
QMKREASNSASRRQVRNDLEEEDDEESYYRYMEENPNAGLVPVDEDHPEVEYDEDGNPIA
PDKKRIIDPLSPIDHSTIEYKPFQKNFYNEHPEISSLSSDQVKELREALGIKVTGNNAPK
PVSSFAHFNFDEKLLKVIIKAEYSSPTPIQAQAVPCGLLGRDVLGIAQTGSGKTAAFLWP
LLKHVSAQTPVEEGEGPIALILAPTRELALQIYNEAKKFARVYDLRVICTYGGGSKWEQS
LALKEGADIVVATPGRIIDHVKTGSTNLERVTFLVLDEADRMFELGFEPQVRSVCNHVRP
DRQTLLFSATFRKKVERLAKDALQDPVKISQGILGQANEDVTQHVLLLKDQEAKRNWLYG
ILVELLSAGSVLLFVTKKLDAEQMAHNLKVKEFECLLLHGDMEQCDRSQVIMSFKKKECS
LLVATDVAARGLDIPHVRTVICFDISRDIDTHTHRIGRTGRAGTQGTAYTLLTPQDKEFA
GHIVKNLEMANQNVPQEVLDLALQSSWYRKQRFRKKGESANVGGIGLGFKEKSSQPMKGF
VPAGGNSSSSSETPSSTTSAPRGPATDRLSAMKAAFRLQYQNQFTASADQPPPPAPPTRK
KSRWE
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgagtggttttaactattccggctttaatatgaataaagctcctactacaagacataat
gcagtgccacctccttcatcgataagtggcccttcttcatctataagtggcttgagtaag
cagggctattcaacaatgaatgctattagccaaaacgctttatctgcagcttggggtggc
agtaagaaaagagctgctactgaagatgagtattttgaggatgatgaagaagaaacagtg
ccagacttggcgtatattccagctcctgacagcccaacgagaattgaaatggaaaagaag
aaacagcaagaagaagaagaagatgatcctcttgatgcgtatatggctggtattgagtac
cagatgaaaagagaagcttcaaatagtgcctctcgaaggcaggtaagaaatgatttagaa
gaggaagatgatgaagaatcatattaccgatatatggaagaaaatccaaatgctggatta
gttccagttgatgaagaccatccagaggtagaatatgatgaagatggaaaccctattgct
cctgataaaaaaaggattattgatccattatcacctatagaccattctacaatagaatat
aagccattccaaaaaaatttctataatgagcacccagaaatatcttctttatcttcagat
caggtgaaagaactgagagaagctttaggtatcaaagtaacaggaaataatgcaccaaaa
cctgtctcttctttcgcccatttcaattttgatgaaaaacttctaaaagtcataatcaaa
gcagaatattcatctcccactcctattcaagcacaagctgttccttgtggacttttggga
agagatgttctgggaattgctcaaactggtagtggtaagactgcagcatttctttggcca
cttctgaaacacgtatctgcacaaactcctgtagaggaaggagaaggacccattgctttg
atattagcccctaccagggaattggcgttacaaatatacaacgaagctaagaagtttgct
agagtttatgatttaagggtcatttgtacttatggtggaggctccaaatgggagcagagt
ttggctctgaaagagggggcagatattgtagttgctactcctggtcgtataatcgatcac
gtcaaaacaggatcaacaaatctcgaaagagtaacatttttggttctcgatgaagctgat
agaatgtttgaacttggttttgaacctcaggttaggtcagtttgtaaccatgttcgtcca
gacagacaaacattacttttcagtgccactttccgtaagaaagtagaaagattggcaaaa
gatgctctgcaagatcctgttaagatatcacagggtatcttgggccaggcgaatgaagat
gttacacagcatgttctccttttgaaagaccaagaagcaaaaagaaactggttgtatgga
atattggtagaactgttatctgcaggatcagttcttttgtttgttacgaaaaaattagac
gcagagcagatggctcataatctcaaagttaaggagtttgaatgtcttcttctgcatggt
gacatggaacaatgtgatagaagtcaggttattatgtctttcaaaaagaaggaatgctca
cttttggttgctaccgatgtggcagctagaggtcttgacataccacacgtgagaacagtc
atatgcttcgatatatctcgcgacatagacacacatacgcacagaataggtaggacagga
agagcaggtactcaaggtacagcgtataccttactgacgccgcaagataaagaattcgca
ggccacatcgttaagaatttagaaatggctaaccagaatgtgccccaggaagtattggat
ttggccttgcagagttcttggtatagaaaacagaggttccgcaagaagggtgaaagtgcc
aacgttggtggcataggtttagggtttaaggaaaaatcaagtcaacctatgaaagggttt
gtcccagcggggggcaatagtagcagcagcagcgaaactccttcatctacaactagtgct
ccaagaggtcccgcaactgaccgtttatcagccatgaaagccgctttcagattacaatat
caaaatcaatttactgcaagcgcagatcagcctccaccgccagctcctcctacccgaaaa
aagagtagatgggagtga
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