KEGG   Harmonia axyridis (harlequin ladybird): 123683494
Entry
123683494         CDS       T10650                                 
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein isoform X1
  KO
K12857  Prp8 binding protein
Organism
haxr  Harmonia axyridis (harlequin ladybird)
Pathway
haxr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:haxr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    123683494
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:haxr03041]
    123683494
Spliceosome [BR:haxr03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    123683494
 Complex C
   U5 SnRNP specific factors
    123683494
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_2nd EIF3I Beta-prop_EML_2 WDR55 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_EIPR1 NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_DCAF4 ANAPC4_WD40 Beta-prop_SPT8 Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_IFT140_1st Ge1_WD40 Beta-prop_Nup120_160 Beta-prop_WDR19_1st WDR90_beta-prop_4th eIF2A Beta-prop_WDR75_2nd Beta-prop_RIG_1st Beta-prop_HPS5 Beta-prop_WDR35_TULP_N Nbas_N WD_LRWD1 Mala_s_1-like Beta-prop_VPS8
Other DBs
NCBI-GeneID: 123683494
NCBI-ProteinID: XP_045478543
LinkDB
Position
6:complement(10904288..10920982)
AA seq 348 aa
MLNENKRKAADQNALLPVAKKSRNEVANVNKNKSVLQAAPARTSNLFAPIMLLEGHEGEI
FTVKFHPDGQYLASSGFDRKIFLWSVYGECENISVLTGHTGAVMELHFSRDGSNIFTAST
DHTLGLWDIVTAQRIKKYKGHTTFVNSLDVARRGPQMIVSGSDDNIIKIWDIRKKQSVTN
LNSSYQVTAVSFNDTSEQVFSGGIDNDIKVWDLRKDEVLYTLKGHTDTVTGLSLSPDGSY
LLSNSMDNSLRIWDIRPFAPVERCVKMFSGHQHNFEKNLLKCSWSSDGNRVSAGSADRFV
YVWDTTTRRVLYKLPGHNGSVNDVDFHRDEPIIVSGASDKQIYLGEID
NT seq 1047 nt   +upstreamnt  +downstreamnt
atgctcaacgaaaataaaagaaaagctgcagatcaaaacgctttacttcctgtcgctaaa
aagtcccgaaatgaagtcgctaacgttaataagaacaaaagtgtattacaagcagcccca
gcaagaacttcaaatcttttcgcaccaataatgctattggagggacatgaaggagaaata
ttcacagtcaaattccatcctgatggacaatatttagcttcttctggatttgacagaaaa
atttttctatggagtgtttatggagaatgtgagaatatatctgtcttgactggtcacact
ggagccgtaatggaactacatttctcaagagatggatctaatatctttacagctagcact
gatcatacccttggcctttgggatatagtcacagctcaaagaataaagaagtataaagga
cacacaacatttgttaattctttagatgttgcgagaaggggaccccaaatgattgtttct
ggtagtgatgataatataataaaaatttgggatattagaaaaaaacagagtgtcactaat
ttgaattcatcatatcaagtaacagcagtttcttttaatgatacatcagaacaagttttt
agtggaggaattgacaatgatattaaagtatgggatttgcgtaaggatgaagtactttat
actttgaaaggacatacagatactgttacaggattatctttgagtcctgatggttcatat
ttgctatctaattccatggacaacagtcttaggatatgggatataagaccctttgctcct
gtagaaagatgtgtgaaaatgttttcaggtcatcaacataattttgagaaaaatttgttg
aagtgttcgtggtctagtgatggaaacagagtatctgcaggatcagcagaccgatttgtc
tatgtttgggataccactacaagaagagttctatataaattgccaggacacaatggcagt
gtaaatgatgtagattttcatcgtgatgaaccaattattgtatcaggtgctagtgataag
caaatctacctaggagaaattgattaa

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