Harmonia axyridis (harlequin ladybird): 123683864
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Entry
123683864 CDS
T10650
Name
(RefSeq) uncharacterized protein LOC123683864 isoform X1
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
haxr Harmonia axyridis (harlequin ladybird)
Pathway
haxr03015
mRNA surveillance pathway
Brite
Transcription machinery [BR:
haxr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
123683864
Messenger RNA biogenesis [BR:
haxr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
123683864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
123683864
NCBI-ProteinID:
XP_045478782
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Position
7:924335..938992
Genome browser
AA seq
1685 aa
AA seq
DB search
MMSEEVKAYVSSLADLTFNSKPLINMLTMLADENVGHAAEIVDVVEDHLAKVKTDVKLPV
LYLIDCIVKNVGGPYNELFSRNIVSTFCNVFRVVDEKTRAEMFKLRQTWNEVFSPKKLYA
IDVQIRVLDPAWPVTAPVPNNCIHLNPKFLKNTTGASPTHPKAAVMPNVPVANADPATLD
MQQQLIQKQKELLELQQKKLELELLQTKVRLREQISAKTVPGAPTILPQNVLLKPEVAKQ
LLPPNSLRKIVDNAQIVMPSNILALDTSTSSLSNAPTIKNQRMQFQATNTGPKIQPANSA
LVAAAMNRPIRDPRLMRMQNQQLQEKQTLNTANINVQIENKNNSESTNKIVNSKTSVRDI
QKDPRLKNIHDNAPPHKFTDVSKPKSKLSPKSKSDRNQGSRSSRPKSQLDDPKSTSNKNS
SSLDSPKKSKADKSSPSKSPSSRSNNRKDVPSPKSKMFRSSREPKISKSDTALPVFKDVK
NSKNRNYVRRNRSPQFSPEPSAKDIDLRLNGPPEKQPRLSPDKGIQHREPTPPLTVAMDV
DLRHMPPSIGKKRSSLDDIEVMPSKKSKTEIFDQLFGNEDTDLRKFAVPAIDRPPTPPPP
IISSSEVTAEQQKELQQPKADLQTVRAKLAANLKKSNSPLKRKAEDEDLRLSQVSSTTDI
PNKIIISKADGEKIKEGGMTSVQQKELMNKIIAQIEAQKLKEAKQKNHEEAIGNISLTPI
SDDELDTDFNEENHKARQDSPVLAPPASFGDKDERIMLPQQPMIPPVDDAFNKRFGRDIR
RGGIGPIWRGVRGRRHWEGPHMRPPMRPWMQQPPLNKWGPGMYRPPPPFHDMEQNDRRSP
EGDIIIESASQEDIKTITIDGLPRDIRYYDEVAIIFMNWDDPREISFQDGTRRVIFNDTD
MYMMNFNEPYREHRIGDSLHQVKLGSPSREIYIDYKPYECYFGGPGITIDLNGKVTTVKL
DGPPPQVKIGESRSDLVAGKIKLIIDAKTIIPIFLDAKVQKFNYNGDQHTVQFLPGLKNA
LINNEHFEVQFGGLPKPVMLKDKRHYIRFSVLPKALKQGHIQIKGLETEDFNSSPQIEES
IDLNEPALPIPQRVLKAYDPSTSPDDSSSGNLFQNVLQQQNIQNLDFLTNVISTSEQVSN
SYQVESNPPTQQPENTSNPTNLFNMSNINDLFQKLVASGMVTTSATLPVKETPPPVQQNH
YREKSRHSFKQTKKHPPLKPVTFDKPELLKVRQGALYEKLYIGMQCSSCGMRFPPEQSLY
YSQHLDWHFRQNRRGKKNARVASSRKWYYSLSDWSKYEEIEDLDEREKNFFDQQQQAENT
AEEAAEETEVPSVTADPELQDICDVCGDKFEIFFHEDKEEWHLKNAVREDDRIYHPICFE
EYQQSLQNAALAQSDTEAEDKPVSNEASQIPGIEIVLDDEDEDMEKPEENEVILDESDES
KLTTCEEKTEEQPTEYEDEDDDVIIKEETIEQIILDDDDEKMEDDEEVSQSSVPASSRGS
SPIMKEPAAEVIDDGFVDVNEGLLMLQNGGGPVKVKSEPIDDGYMAEENAFENSMEEEEE
DKTEEVDEPKDSESEQTQAQSAFVPSIDGNLEMDISAPTPVSNVCGKIKINIHKPLPVIP
PRYNNKDISPESDTLPESVIDPSQPLPPGEEPILLKLKPALQGVELKKMPRVQKGSELSG
MCTIM
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtgaagaagttaaagcgtacgtatcgagtcttgcggaccttacttttaacagt
aaacctctgatcaatatgttgactatgcttgctgatgaaaacgttggacatgcagctgag
atcgtagatgtggtggaagatcatcttgctaaggtgaaaactgatgtgaaattaccagtt
ctatatctcatcgattgcatcgtcaagaatgttggtgggccgtacaacgaattattcagt
cggaatattgtatctacattttgcaatgtatttagagtggtggacgaaaagaccagagca
gaaatgtttaaattgcgacaaacttggaacgaagtattttcccccaaaaaactgtatgct
attgacgttcagataagagttttggatcctgcctggccggtgacagcacctgtaccaaat
aattgtattcatctcaatcctaaatttttgaagaatactacaggtgctagtccgactcat
cctaaagcagcggttatgcccaatgttcctgttgcgaatgctgatcccgcaaccttggat
atgcagcaacagctgattcagaagcagaaagaacttctcgaattacaacaaaagaaattg
gaattggagctacttcaaactaaagtcaggttaagggagcaaataagtgcaaaaactgtc
ccgggagcacccacaattctacctcaaaatgttctattgaaaccggaagtggcaaagcaa
cttctgcctcctaatagtttaaggaaaattgtagataacgctcaaattgttatgccttcg
aatatactagccttagatacttcaacgtcgtcattgagtaatgctccaaccatcaagaac
caaagaatgcaattccaagcgaccaataccggcccaaaaatacaacctgcaaatagtgcc
ctggtagctgctgctatgaatcgacccattcgtgacccgaggctgatgaggatgcagaat
cagcaattgcaagagaaacaaactcttaatactgcaaatatcaatgttcaaattgaaaat
aaaaacaattcagaatcaacaaataaaattgttaacagtaaaacaagtgttcgagacatt
caaaaagatcctcgactgaaaaatattcatgataatgcccctccccataaattcactgat
gtaagtaaacccaaatccaaactttcacccaaatctaaatctgaccgaaatcagggtagt
agatcatctcgccccaagagtcaattagacgatcctaaatctacttctaataaaaattct
tcatcccttgattcccctaaaaagtccaaagctgataaatcttccccttcaaagagccca
tctagtcgcagtaataatagaaaggatgtgccatctccgaaatctaaaatgttcagatcg
tcaagagagcctaagatctcgaaaagtgatacagcgttgcctgttttcaaagatgtgaag
aacagcaaaaacaggaactacgtgagaagaaaccgatcgcctcagttcagtccagagccg
tcagcgaaagatatcgatcttaggttgaatgggcctccggaaaaacaacctaggctttca
ccggataagggtattcaacacagagaaccaactcctcctttaacagtggcaatggacgtc
gatttaagacatatgccaccatccattggaaaaaagagatcttctttagatgacatagaa
gttatgcctagcaagaaaagcaaaacggaaatttttgaccaattatttggcaatgaagac
acagatttgaggaagttcgctgtgccagcaattgacaggccacctacaccgccacctcca
attatttcctcatccgaagtgactgcggaacagcaaaaagaacttcaacaacccaaagcc
gatctacaaacggtcagggcgaaattggctgcaaatttgaagaaatctaactctccatta
aaaagaaaagcggaagatgaagatcttagattaagtcaagtttcatctacgacagacatt
cccaataaaataataatatcgaaagcggatggggaaaaaattaaggaaggcggtatgaca
tccgttcaacagaaagaactgatgaacaaaatcattgctcagatagaggctcaaaagttg
aaagaggccaaacagaaaaatcacgaagaagccattggaaacataagtctcacgccaata
agcgacgatgaactggataccgacttcaatgaggaaaatcacaaagctagacaagacagt
cctgtactagcgccacctgcttcattcggtgataaagacgaaaggattatgttgccacag
caaccaatgatccctcctgtggatgacgctttcaacaaacgtttcggcagagacataaga
agaggaggcataggtccaatttggaggggcgtgagaggtaggcggcactgggaggggcct
catatgagaccgcccatgaggccgtggatgcaacagcctccactgaacaaatggggacct
ggaatgtacagacctcctcctcccttccatgatatggaacaaaacgacagacgctcacct
gaaggtgatataatcatagaatcggccagtcaagaagacatcaaaacgataacaatcgat
ggattacccagggacatcaggtattacgatgaagtcgccataattttcatgaattgggat
gatccgagagagatatcgttccaagacggtaccagaagggtgattttcaacgataccgat
atgtatatgatgaatttcaacgagccctatagggaacataggatcggagatagtttacat
caggtgaaattaggaagtcccagccgggaaatttacatcgactataagccttacgagtgt
tacttcggaggtcccggaatcacaatcgatttgaacggaaaggtgactacggtcaaactg
gatggtcccccgccccaagttaaaattggagagagtcgctcagatctggtcgccggaaaa
attaagcttatcattgacgccaagacgattataccgattttcttggacgccaaagtgcaa
aagttcaattacaacggagatcaacacaccgtacagtttttgccggggcttaaaaacgct
ctgataaataacgaacatttcgaagtgcaattcggtggtttgcccaagccggttatgcta
aaagataaaagacattacataaggttctcggtcttgccgaaagcgttgaaacagggacac
atccagataaagggcttggaaactgaagatttcaattcgagtcctcaaattgaagaaagt
atagatttgaatgaacccgcattgcctattccgcaaagggtcttgaaggcctacgacccc
agtacttccccagacgattccagttccggcaatctgttccagaacgtattgcaacaacaa
aatattcaaaacttggacttcctaacaaacgtgatatctacatcggaacaggtgtcgaat
tcataccaagtggagtccaatccacctacgcaacaaccggagaacacctcaaaccccaca
aacctgttcaatatgagcaacataaatgatcttttccaaaaacttgtagcttccggcatg
gtaaccacaagtgccactcttccggttaaagagactcctcccccagttcaacaaaatcat
tacagagagaaatcgagacattctttcaaacagaccaagaaacaccctcccctaaaacct
gtgacattcgacaaacctgagctgttgaaggtaagacagggtgccctctatgagaaactg
tatattgggatgcagtgcagcagttgtggtatgaggttccctcccgagcaaagtctgtac
tatagccagcatctagattggcatttcaggcagaatcgcagaggcaagaagaacgctaga
gttgcttccagtaggaaatggtattattctctaagcgactggtctaaatatgaggaaatt
gaggatctggacgaaagagagaaaaacttcttcgatcaacaacaacaagcggaaaacaca
gcagaagaagctgcagaagagacggaagtaccaagtgttacagccgatcccgaactacaa
gatatctgtgacgtttgtggagataaattcgaaattttcttccatgaagataaagaagaa
tggcacctaaagaatgcagtaagagaagatgatagaatttatcaccctatttgttttgaa
gaataccagcaatcccttcaaaatgctgcattggcacagtccgacacggaagcagaagac
aagccagtctcgaacgaagccagtcaaatacctggcatcgagattgtgctggatgatgaa
gatgaagatatggaaaaaccggaggaaaatgaagtcatcttagacgaaagcgatgaatcc
aaattgactacctgcgaagagaaaacggaagagcagccaaccgaatacgaggatgaagat
gacgatgtcatcattaaagaagaaacgatcgaacagataattctggatgatgacgatgag
aagatggaggacgacgaggaagtttctcaatcgagtgttccagcttcaagtcgtggatct
tctccaatcatgaaagaaccagcggctgaagttattgacgatggctttgtggatgtgaac
gaggggttgttgatgctgcagaatggggggggacctgtgaaggtgaaatctgaacccatt
gatgatggttatatggcggaagagaatgcttttgagaattcaatggaggaggaagaagaa
gataaaacggaggaagtggacgaaccaaaggattccgaatcggagcaaactcaagcccaa
tcagcatttgttcccagtatagacggtaatttagaaatggacattagtgcacctacacca
gttagtaatgtttgtggaaaaataaaaataaacattcacaaaccattgcctgtaatacca
cccagatacaataataaagatatatctccagaaagtgatactctacctgaaagtgtaatt
gatccgtcacaacctttgcctcctggcgaagagcctattttacttaaacttaagcccgcg
ttgcaaggtgttgagcttaaaaaaatgccgagagttcaaaaaggttcagaactttcaggc
atgtgtacaattatgtga
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integrated database retrieval system
