Harmonia axyridis (harlequin ladybird): 123684238
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Entry
123684238 CDS
T10650
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
haxr Harmonia axyridis (harlequin ladybird)
Pathway
haxr03022
Basal transcription factors
haxr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
haxr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123684238
09124 Replication and repair
03420 Nucleotide excision repair
123684238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haxr03021
]
123684238
03400 DNA repair and recombination proteins [BR:
haxr03400
]
123684238
Transcription machinery [BR:
haxr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
123684238
DNA repair and recombination proteins [BR:
haxr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
123684238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
HTH_36
Motif
Other DBs
NCBI-GeneID:
123684238
NCBI-ProteinID:
XP_045479371
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All DBs
Position
7:complement(14847382..14851113)
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AA seq
562 aa
AA seq
DB search
MTTSSEDVLLQIPQVRFKKGDGTLFLMDQRLIWMVENRDTVAVSHLYEDIKSQKISPEGK
AKIQLQVVLHNGVSSTFHFSNTKGLSAQVADRDKVKEMLQGLLPKFKKKMDRELEEKNRL
LMSNPALLQLYKDLVMPEVVTSEEFWSQHALKYTQNQKQQPQEIGVSGAFLADIKPQTDG
CNGLKYNITPDIIECIFKTYPAVRKKFIDNVPSKMSESQFWTKFFQSHYFHRDRKYAESK
DIFTECGKIDDQEMKKDIQRGVDDPLVNITEFEDKTLDEAYGASSERTNVNSGTVSQAMI
KRFNQHSIMVLKANKNKTSDTNSQGAVDNVKKTNGMTVSNNDKSKNKEEGSMEPVKKKQK
ILEKITYEDLESDDKTKNNSNIHLNLSKVERYLHGPMPDTIIEHINPNEGSSILRWVFQE
AKQWNVSQTRQTSHNLVSPAAAVGALGELSPGGALMRGFQEQSLAQLVPPNIETEMRNLY
LALCELLNHFWKCFPPTQPNQEEKVVKMHEALHRYHTAKLKPFEDKLIRELSPLSHHLTK
HLNQLLNAAYQKFSNWQKLKHR
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgactacctcaagcgaagatgttcttctccaaatacctcaagttcgattcaaaaaagga
gatggaactctttttcttatggatcaaagactgatttggatggtagaaaacagagatact
gtagcagtttcccatctttatgaagacataaaatctcagaaaatatctcctgaaggtaaa
gcgaaaattcaacttcaagttgttttacacaatggggtttcttcaacttttcatttttca
aacactaaaggattatcggcacaagtcgcagatcgagataaggtcaaagaaatgttgcaa
ggcctattgccaaagtttaagaaaaaaatggatcgagaacttgaagagaaaaatagatta
ttgatgtcaaaccctgcccttttacaattatataaggatttagttatgcctgaagtggtc
acttctgaagaattttggagtcaacatgcactcaaatatacacaaaatcagaaacagcaa
cctcaagaaattggtgtttctggagcatttctagcagatataaaaccacaaactgatggc
tgtaatggattaaaatataatataactccagatattatagaatgtatcttcaaaacatat
ccagctgtaaggaagaagtttattgataatgttccatcaaaaatgtctgagtctcaattt
tggacaaaattttttcagtcacattatttccacagagataggaaatatgcagaaagcaag
gatatatttacagaatgtggcaaaatagatgaccaagaaatgaaaaaagatattcagagg
ggtgtcgatgatccgttagtaaatattacagaatttgaggataaaacattggatgaggct
tatggagcttcctcagaaagaactaatgttaatagtggaacagttagtcaagctatgatc
aaacgtttcaatcaacattcaataatggtattaaaagctaataagaataagactagcgac
actaattcgcaaggagctgtagacaatgttaaaaaaaccaatggcatgacagtaagcaat
aatgataaaagcaaaaacaaagaagaaggaagcatggaacctgtgaagaaaaagcaaaaa
attttagaaaaaatcacttatgaagatttagaatcagacgataaaactaagaataattca
aacattcatctgaatctttccaaggtggaaagatatcttcatggtccaatgcctgacacg
ataatagaacatataaatccaaatgaggggtcctcaatattacgatgggttttccaagaa
gctaaacaatggaacgttagtcaaaccaggcaaacctcccataatttagttagtcctgct
gcggcagttggagcactaggagaactctcaccgggtggcgcccttatgaggggattccag
gaacaatcattagctcaattggttccaccaaatattgagacagaaatgaggaatttgtat
ttagcactttgtgaactactcaatcatttctggaaatgttttccacccacacagcccaat
caagaggagaaagttgtcaaaatgcatgaagcacttcacagatatcatacagccaaattg
aaaccatttgaggataaactaatccgagaactttctcccctttctcatcatctgaccaaa
catttgaaccaattattgaatgcagcctatcagaaatttagcaattggcaaaaattgaag
catcggtga
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