Harmonia axyridis (harlequin ladybird): 123684493
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Entry
123684493 CDS
T10650
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
haxr Harmonia axyridis (harlequin ladybird)
Pathway
haxr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
haxr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123684493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
haxr03041
]
123684493
Spliceosome [BR:
haxr03041
]
Complex B
Other components
Prp19-related factors
123684493
Complex C
123684493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
Nup35_RRM_2
RRM_YTH1
RRM_occluded
zf-CCCH_4
zf-CCCH_2
zf-CCCH
RRM_3
zf-CCCH_10
zf-CCCH_12
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
123684493
NCBI-ProteinID:
XP_045479735
LinkDB
All DBs
Position
7:10206126..10208490
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AA seq
427 aa
AA seq
DB search
MATSKTTNTYNRQNWEDSDFPILCQTCLGDNPYIRMTKEKYGKECKICARPFTVFRWCPG
ARMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAALKITDNLPKSDVNKEYYIQN
MEKQLSRSDSGALANNSKLNEPNDLLMRLARTAPYYKRNRPHVCSFWVKGECRRGEECPY
RHEKPTDPDDPLADQNIKDRYYGTNDPVADKLLKRAAAMPALPPPDDKTITTLYIGNLGN
LTEQDIRDHFYQYGEIRTVSIVPKQQCAFVQYTTRQAAESAAEKTFNKLILGGRRLTIKW
GRSQGRIGPLMGIQNMEVYEPVPGLPGALPELSNNFFNLEPGHIPLPNIPPPPSLMMPQL
FGPPPLPQFFFNPPQLPPFVPNPSVAASAASSVTKEQSIAAVKPTVHYPSQDPSRLGATQ
ITTERQE
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggctacttctaaaacaacaaatacttacaatcggcaaaattgggaagattccgatttt
cctatactgtgtcaaacatgtttgggagataacccttatattcgaatgacgaaagaaaaa
tatggaaaggaatgtaaaatatgtgctaggcctttcacagttttcagatggtgtcctgga
gctagaatgcgctttaagaaaactgaagtatgtcagacttgcagcaaattgaaaaatgtc
tgtcagacttgtttgctagatctagaatatgggttacctattcaggtcagagatgctgct
ttgaaaattactgataatcttcctaaaagtgatgtgaataaagaatattatatccaaaat
atggagaagcagttgagtagatcagattctggtgcattggccaataacagtaagctaaat
gaaccaaatgatcttttgatgcgtttagcaagaactgcaccttattataagaggaataga
cctcacgtatgttctttctgggtcaaaggtgaatgtagaagaggtgaagaatgtccatat
agacatgagaagcctacagatcctgatgatccattggcagatcaaaatatcaaggataga
tattatggaactaatgacccagttgctgataaattactgaaaagagctgctgccatgccg
gcattgccacctccagatgataaaacaattacgactttatatattggaaatcttggaaat
ttgacagaacaagatataagggaccacttttaccaatatggtgaaattcgaactgtgagc
attgttcctaaacaacaatgtgcttttgtacagtatacaactcgtcaagcagcagaatcg
gcagctgaaaaaactttcaacaagttgatcttgggtggtaggcgcctcacaatcaaatgg
ggaagatctcaaggaagaattggtcctttgatgggaattcagaatatggaagtgtatgaa
ccagttccaggcttacctggagctttgccagaattgagcaataattttttcaatttggaa
cctggacatataccattgccaaacattcctccaccaccgtctttaatgatgcctcagttg
tttggtcctcctccgctacctcaattctttttcaatccaccacaattgcctcctttcgtt
ccaaatccaagtgttgcggctagtgctgcaagttctgtaactaaagaacagagtattgct
gctgttaaacctactgtgcattatcccagtcaggatcctagtaggttaggtgcaacacaa
ataactactgaaagacaggaatga
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