Harmonia axyridis (harlequin ladybird): 123684967
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Entry
123684967 CDS
T10650
Name
(RefSeq) exosome complex component RRP43-like
KO
K12586
exosome complex component RRP43
Organism
haxr Harmonia axyridis (harlequin ladybird)
Pathway
haxr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
haxr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123684967
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haxr03019
]
123684967
Messenger RNA biogenesis [BR:
haxr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
123684967
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
DUF1717
Motif
Other DBs
NCBI-GeneID:
123684967
NCBI-ProteinID:
XP_045480452
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All DBs
Position
7:19222228..19223445
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AA seq
274 aa
AA seq
DB search
MEEEFRSFQYFKYYKEHFSCGIRPDGRKFDKYRPVVLNVGSIETADGSALAKVGDTIIMC
GIKAELCTPKPENNKEGFLIPNIELSPLCSPKFKPGPPSEEAQIATQLIADIVRSSQCLN
LEELCIFPEKLAWCLFADLECISYDGALVDACLLALTTALKTVRLPTVDYDPATNNKIVK
EEEKKNLNIQSIPICSTFSVFEEKLILWDPTSEEESICSSIINIVVKDERLSSVHKPGGS
PISDDDLLDCIEKSKERAGHIHKLIEEALKLFKH
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagaattcaggagtttccagtattttaagtattataaagagcatttctcgtgt
ggtattagacctgatggcagaaaattcgacaagtatcgtccagttgttttgaatgttggc
tcaatagaaacagctgatggatcagctctcgctaaagttggagacactataataatgtgt
ggtatcaaggcagaactttgtacacctaaacccgaaaataacaaagaaggctttttaatt
ccaaatattgaattgtcaccactttgctcccctaaattcaaacctggtccaccaagcgaa
gaagcacagattgctacacaactaattgcagatatagtgagaagttcacagtgtttaaat
ttggaagaactctgtatatttcctgaaaagctagcatggtgtttattcgctgatttagaa
tgcattagttacgatggtgctttagttgatgcttgtttattagccttaacaacagcttta
aagactgttcggttaccaacagtagattatgaccctgcaacaaacaataagatagttaag
gaagaagaaaaaaaaaatttaaacattcagagtatccctatttgttcaacattttctgtt
tttgaagaaaagttgattctatgggaccccacatctgaagaagaatctatttgctcttca
ataatcaatattgtggttaaagatgaacgattatcctctgttcataaaccaggaggatcc
ccgatttctgatgatgatctgctggattgtatagagaaaagcaaagaaagagcaggacac
attcataaattaattgaagaagctttgaaactatttaagcattga
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