Harmonia axyridis (harlequin ladybird): 123685183
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Entry
123685183 CDS
T10650
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
haxr Harmonia axyridis (harlequin ladybird)
Pathway
haxr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
haxr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123685183
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haxr03019
]
123685183
Messenger RNA biogenesis [BR:
haxr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
123685183
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
123685183
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
123685183
NCBI-ProteinID:
XP_045480757
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All DBs
Position
7:complement(26372296..26373678)
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AA seq
297 aa
AA seq
DB search
MPGEILIRSASSRVNTCVAVERSQRHPEIYTPGQTITEQSVIRGHGTYEEDGILKASVAG
IQEKVNNLISVRPLKTRYNGEIGDVVVGRITEVQQKRWKVNTNARLDSVLLLSGVNLPGG
ELRRRSQEDEHMMRKYLQEGDLISAEVQSIFSDGSLSLHTRSFKYGKLGQGFLVKVSPSL
IRRSKTHFHKLQIGINLILGTNGFIWVYPTSDETEESVGGFILNKEQVIPEDVRMIMTRV
RQCILILAQSKIMLYDTSILFAYEESMKYPISEMIIPEAMLDVAVLTQHHLIEAENE
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgcctggagaaatattaatacgttctgcatcgagcagggtaaatacatgtgttgctgtt
gaaagatcacaacgccatccagaaatttatactccaggacaaaccattactgaacagagt
gttataaggggtcatggcacctatgaagaagacggaatacttaaagcttctgtagctggt
attcaagagaaagtaaataatttaatttctgtacgtccactgaaaacaagatacaacggc
gagattggggatgttgtggttggtcgaattacagaagttcaacagaaaaggtggaaagtt
aacacaaatgcacgattagattctgttttattactgtctggagtgaatttaccagggggg
gaattgaggcgacgatcacaagaagatgagcatatgatgagaaaatatctccaagaagga
gatcttataagtgctgaagttcaaagtattttctcagatggttctctttctcttcataca
agaagtttcaaatatggcaagcttgggcaaggatttttagttaaggtatccccatctctt
attagaagaagtaaaacacatttccataagttacaaataggaataaatctaattttggga
acgaacgggtttatatgggtgtatcctacatcagatgaaactgaagaaagtgttggagga
tttatccttaataaagaacaggttattcctgaagatgtcaggatgattatgactagagta
aggcagtgcattttaatattggctcagagtaaaattatgttatatgatacaagcatctta
tttgcatacgaggagtccatgaaatatccaatttcagaaatgataattcctgaagcaatg
cttgatgttgcagttttaacacagcatcatttaattgaagctgaaaatgaataa
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integrated database retrieval system
