Harmonia axyridis (harlequin ladybird): 123686477
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Entry
123686477 CDS
T10650
Name
(RefSeq) putative transcription factor capicua isoform X1
KO
K20225
capicua transcriptional repressor
Organism
haxr Harmonia axyridis (harlequin ladybird)
Pathway
haxr04013
MAPK signaling pathway - fly
Brite
KEGG Orthology (KO) [BR:
haxr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04013 MAPK signaling pathway - fly
123686477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
haxr03000
]
123686477
Transcription factors [BR:
haxr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
123686477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_Cic_C
DUF4819
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
123686477
NCBI-ProteinID:
XP_045482598
LinkDB
All DBs
Position
X:complement(4203424..4229131)
Genome browser
AA seq
1603 aa
AA seq
DB search
MSNMDMCVRKLPKKRKFDPSELEENNVQNLGTPCIPVSVVQSVITTPQSTAVDYSCPPRL
NEGSTFNNKQNVVDLSEWCDHRVLAKQGDWYYPGVIRDANGTNITVALDGRDERILQYCN
VLDKDCYDIIGDASPSFNQITLGARVCVRHDQSMFVEGVVCKIELQPPKFLVAKLGEQHC
YITVKRSELRLLRPPWYDELENLEEPSTNIISPPQLQPEYYPRNVSPPGLHTPVSVSTPV
STSRNYEDFNESEDELRREDIIFPSEGNDKLSGSSKRSSVHSRGSSSSSITPRSQPTTPR
SQAATPHKYKKGDIVSNPNGIRKKFNGKQWRRLCSKDGTCNKESQRRGYCSRHLSLKGSS
LRSNSSYPRSNSKGDGEDTSRDSETSPNCSERRITGRFDQDETDVANMLVSLGSSRSATP
VFSPNGQATSPHHMQSPITVGSRQNVFMPISSHSLQKRTSPVPTGYNTPYHQPVIRPELV
RPVQGTTSVIRVSPNPRQWNSVTSEQQQHNIILQHALNTTAQSMEIESQQTQASSTVYRV
TPQAIDRNILIIKNEDDQKDITSFQRQVIQSDHLQATSTIRVATNNISSISSGHTNNAGI
LQTNSIGTNLLPTQLVPVLPAATQSVVKRVSTATVHHTPSPPIIMKQEQVSPSLNNHKEH
IVQHVSTPSQQHLSLQVQQQIRIPMQQQMSPSTPCLNQNRLLMAHPKVSTPNNNNNQMQQ
SAFVIPWHTLVPILTTTTGPISPPSSELSPPLSAPPIPLSRTGGDINDEEHEIDSLPVTI
EEDDDVFEPETTDSIDTSAGNKRRSQSLSALSNSNKDGSLVKTKDRIRRPMNAFMIFSKR
HRAMVHQRHPNQDNRTVSKILGEWWYALAPERKKKYHELASEVKEAHFKAHPEWKWCNKD
RRKSSTGSVRGKLNSSSEMGDIGEALPSPQALHTPPPIIEVQRPPLQEQDNPGDGSDDDQ
MVICEDTGPEIDLKCKEKVTDSDTESHSDNETAENKQYSQQPYSPISSSGCVDITCRPKP
IKARLSSSDCPKYSPVPTSNSLSLHYQSPVNPSGVSGFQPTGGAFQKMPISPKIVKMEKA
EGGSEIETWSGGGYKTDIPLNIAVSKALDTSNNPWNSLPPRHSEHNLSKMNNNPTLILKQ
QVKPNSIIHVSDTQSSQPVVAIFNSTAIGTRPTGLCLTNDPERSQPVVMVSSSASDHPVQ
YVMMQNSYAISMGDSGVRGLLPTLQILPKAAPTQSVIVNQQQNKILNTSQADYVQSSQLC
ATTTFANNTGVMLRIDQQKDLHSTDSEFNPSQSEVPQSPHLNNSESSSVSEGNKEFKLAP
TPAQLGKAPLQRRQSLAVFSNVNQVQSSKENSPHNPGNEQQNQQEQQLIPQQQSMEGPLT
SPSQKKSFFKRNIEDGMDRVLEQVNFQKKFSSLPQFKPEECQSPSSITAQSPGLFNYKKA
RNLHNTNRLSVEEESEPETPQSVPKSASSSKPIVIGNQFFGPDFNIENVRELTDMGEGNS
PRTPRTPGTSRESDRGHRKILEQRRQLVLQLFKEHNTLFPSTQATSTFQAQHLDIFPNKM
SLQLKIREVRQKMMAHNNLTPHSANSQSSPLTPAEPVRVTSSS
NT seq
4812 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacatggatatgtgtgtacgaaagcttcctaaaaagagaaaatttgatccatct
gaattggaagagaacaatgttcagaacttgggtaccccatgcattcctgtatctgttgtg
caaagtgttattactacaccacagtcaactgctgttgattattcttgtccccctagattg
aacgaaggaagtacattcaataataaacaaaatgtcgttgatttaagtgaatggtgtgat
catcgggtactggctaaacagggtgattggtattatccaggagtcattcgggatgctaat
ggaacaaatataactgttgcccttgatggtagagacgaaagaatactgcagtactgtaac
gtacttgacaaagattgttatgacataataggagatgctagtccctctttcaatcagata
actcttggagcaagggtttgtgttagacatgaccagtcgatgtttgtagaaggtgtagtt
tgtaaaatagaactacaacctccaaaatttctagttgcaaaattaggcgagcagcattgc
tatatcacagttaagagatcggaactgagacttcttcggccaccatggtacgatgaacta
gagaatttggaagagccatctacaaatataatctcaccaccacagcttcagccagaatac
tatcccagaaatgtttctccacctggattacataccccggtttctgtgagcactccagtg
tcaacatctagaaattatgaggacttcaacgagagtgaagacgagctcaggagagaggac
ataatatttccttcagaaggcaatgataagttatccgggagtagtaaaagaagcagtgta
catagtcgaggtagctcctctagcagcataacacccagatcccaaccgacaacaccaaga
agccaagctgccacaccacataagtacaaaaaaggtgacattgtttcaaatccgaacggt
ataaggaaaaaatttaatggaaagcaatggagacggttatgttcgaaagatggtacatgt
aataaagaatcacaacgaagaggttattgctctagacacctcagtcttaagggtagtagt
cttcgaagtaattcatcatatcccagatctaatagcaaaggagatggtgaagatacttcc
agagattctgaaacatcacctaactgtagtgaaagacgtatcactggtcgttttgatcaa
gatgaaacagatgtagctaatatgttagtttcattgggaagctcaaggtcagcaacacca
gttttttcaccaaatggtcaggcaacttcaccccatcatatgcagtcacctataactgtc
ggttctagacaaaatgtcttcatgcctattagtagccattcccttcagaaaaggacatct
cctgttccaactggatataatactccttatcatcagcctgtgatacgacctgagttagta
cgacctgtccaaggaacaactagcgttataagagtttctccaaatccaagacagtggaat
tcagttacatcagaacagcagcagcacaacatcatacttcaacatgccctaaacaccact
gcccagtcaatggaaattgaatcacaacaaactcaagcttcgagcactgtttatcgagta
acaccacaggcgattgataggaatatattgattatcaagaatgaagacgatcagaaggat
attacatcatttcaacgacaggtaattcaaagtgatcatcttcaagctacctcaacaata
agggtggctactaataatatcagcagtataagtagtggtcacaccaataatgcaggcata
cttcagacgaactctattggtactaatttgttaccaactcagctagttcctgttttgcct
gctgcaactcaatcggttgtgaaaagagtatcaactgccacagttcatcatacaccatca
cctcccataataatgaagcaagaacaagtttcaccgagcctcaataaccataaggagcat
atagttcaacacgtcagcacgccatctcagcaacatttatcgttgcaagttcagcaacaa
attaggatacctatgcagcaacagatgtcaccatctactccttgtcttaatcagaacagg
ctgttgatggctcacccaaaagtttcaacaccaaacaataataacaatcaaatgcagcaa
tctgcattcgtcataccttggcatacgttagttccgattttgaccacaacaacaggtccc
atttccccgccttcatccgagttgtctcctcccctttctgcacctcctatacctctatct
aggacaggtggtgatatcaacgatgaggaacatgaaattgattctttgcctgtcactatt
gaggaagatgatgatgtatttgaacctgaaacaactgattctatcgatacgtctgctgga
aacaagagaagaagtcagagtctcagtgctttatccaacagcaataaagatggcagttta
gtcaagaccaaagataggataagaagaccgatgaatgcattcatgattttttcaaagaga
catagagctatggtacatcaaagacatccaaatcaagataacagaactgtatcaaagata
ttaggtgaatggtggtatgcgttagctcccgaacgaaagaaaaaatatcatgaattggct
tctgaagtcaaggaagctcacttcaaggctcatccagagtggaagtggtgcaataaagat
aggagaaaatcatcaactggttcagtaagaggtaagctgaactcttctagtgagatgggt
gatattggtgaagccttgccaagccctcaggctttacatacccccccaccaattatagaa
gtgcaaagaccacctctgcaggaacaggacaatcctggcgatggttctgatgatgatcag
atggtgatatgtgaggacacaggtccagagattgatctcaaatgtaaagaaaaagtaact
gattctgatacggaatctcatagtgataatgaaacggctgaaaataaacaatattctcag
caaccttatagtccaattagtagcagcggttgtgttgatattacatgtagacctaaacct
attaaagctaggttatcttcttcagactgtcccaaatatagtccagtaccgacgtccaat
agccttagtttacattaccaatcacctgtaaaccccagcggtgtttccggttttcaacct
acagggggcgcttttcaaaagatgccgatttctcccaaaatcgtcaaaatggaaaaagca
gaaggcggctcagaaatagaaacttggtcaggtggaggttacaaaactgatatccctttg
aatatagctgtctcgaaagcattagatacttctaataatccgtggaacagcttgccgccc
agacattctgaacacaatttgagcaaaatgaacaataacccaacacttatactcaagcag
caagtcaaaccgaattccataattcacgtgagcgatactcaaagcagtcaacctgttgtt
gcaattttcaattctaccgcgattggtacaagacctactggattatgtttgactaatgat
cctgaaagatctcaacctgtagttatggtttcttcatcggcctctgatcatccagtgcaa
tatgttatgatgcagaattcttatgccatatcgatgggagattcaggtgttagaggctta
ttgccaactttacagatattaccaaaagcagcgcctacacagtccgttattgtaaatcag
cagcagaacaaaattctaaacacttctcaggctgattacgtccagagtagtcagttatgt
gccactactacattcgcgaacaatacaggagtaatgctaaggatagaccaacaaaaagat
ttgcattcaactgatagtgagtttaatccttcgcaaagcgaagttcctcaatcacctcac
ttgaataattcagaatcttcatcggtgtcggaaggaaataaggaattcaagcttgccccc
actccagcgcagttaggtaaagcccccttgcaaaggcgtcaatctttagctgtctttagt
aacgtaaatcaggttcaaagttccaaagaaaattctccgcataatcctggtaacgaacag
caaaatcaacaggaacaacaattaataccgcaacagcaatcgatggagggacctctaaca
tctccgtctcagaaaaaaagttttttcaagaggaatatagaagatgggatggatagagtg
ttggagcaagtcaatttccaaaagaaattttcttctttgcctcagttcaagcctgaggaa
tgtcagtcgccaagttcaataacagcacagagccctggcttatttaactacaaaaaagcg
agaaatctgcataacacaaatcgtttgtcggttgaagaagaatcggaaccggaaactcct
caatctgttcccaaatctgcatcttcttcaaagcccatagttattggcaatcagttcttt
ggaccagatttcaatatagagaacgttagagagttaacagatatgggcgagggtaattct
cctaggacacctagaacgcctggaacttctagggaatcggataggggtcatcgcaagata
ttagaacaaaggcgtcagttggtgctccagttgttcaaagaacataataccttgtttcct
tcgacacaagctacatctacattccaagcacagcacttggatatattcccaaacaaaatg
agtctgcaattaaaaattagggaggttcgacagaaaatgatggctcataataatcttaca
ccgcatagtgcaaatagtcaaagtagtcctttaacacctgccgaacctgtaagagttaca
tccagcagttag
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