Harmonia axyridis (harlequin ladybird): 123686612
Help
Entry
123686612 CDS
T10650
Name
(RefSeq) ATP-dependent RNA helicase Ddx1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
haxr Harmonia axyridis (harlequin ladybird)
Brite
KEGG Orthology (KO) [BR:
haxr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
haxr03041
]
123686612
03016 Transfer RNA biogenesis [BR:
haxr03016
]
123686612
Enzymes [BR:
haxr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123686612
Spliceosome [BR:
haxr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
123686612
Transfer RNA biogenesis [BR:
haxr03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
123686612
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
CMS1
ResIII
PFK
Cas3-like_C_2
Ribul_P_3_epim
Motif
Other DBs
NCBI-GeneID:
123686612
NCBI-ProteinID:
XP_045482804
LinkDB
All DBs
Position
1:32368179..32375278
Genome browser
AA seq
728 aa
AA seq
DB search
MTAFEEFGVLPEIAKALEELDWMLPTDIQAEGIPLVLGGGDVLMAAETGSGKTAAFCLPV
IQIVWETLKDLEKGTSSTKSSLPWTMSLYDRGNALAVAPGGLRVQSREHREWHGTRCTTG
VKSGKWGFEATVTDEGLCRVGWSTLQSTLDLGTDRFGFGFGGTGKKSNNKQFDNYGEPFG
KSDVITCLIDMENGTVKFLKNGIDLGQAFTINKQILNSAFFPAVVLKNAEMAFNFGETEL
KYPLPPNYKPICQANESEIAINSNEEASDPCSAPIQKSNAPQAIIIEPSRELAEQTCDQL
KKFKKYLENPKIKELLVIGGVNVKDQISQLQNEGADIIVGTPGRLEDLIQGGYLSLSSCR
FFILDEADGLLKQGYTDLIERLHRQMPKITGDGKRLQMIVCSATLHAFEVKKMAEKLMYF
PTWVDLKGEDAVPDTVHHVIVKVDPQQDRSWHNLRRQIQTDGVHANDGVRPGNNCAETLS
EAVKILKGEYCVRAINVHKMDRAIIFCRTKIDCDNLERYLKNIDKNKYSCVCLHGDRKPH
ERKANLEKFKRQEVKFLICTDVAARGLDITGLPFMINITLPDEKSNYVHRIGRVGRAERM
GLALSLVSTVPEKVWYHGEWCKTRGRNCWNTNLTDVKGCCIWYNEPQYLADIEEHLNITI
TQVETDMIVPADEFDGKVVYGQKRKAGGSNYQNHTAQMAPIVKELTKLESDAQLIYLNRH
LTKLAKVA
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgactgcttttgaagaatttggagttttaccggaaattgcgaaagccttggaagaacta
gattggatgttaccaacagatattcaagcagaaggtattcctttagtccttgggggtgga
gatgttttgatggcagcagaaactggtagtggaaaaacagccgcattttgtctacctgtg
attcaaattgtttgggaaactctgaaagacttagaaaaaggcacaagctcaacaaaatca
tctctaccatggacgatgtctttgtatgataggggaaatgcattagctgttgctcctgga
gggctcagagttcagtcaagagaacatagagaatggcatggtacacgatgtactacaggt
gttaaatcaggaaaatggggttttgaagcaactgtaactgatgaagggttgtgtagagta
ggatggtctacattacaatctactctagatctaggaactgatagatttggttttggtttt
ggtggaacaggtaaaaagtcaaataataagcagtttgataactatggagaaccatttgga
aagagtgatgtgataacatgccttattgatatggaaaatggaacagtaaaatttcttaaa
aatggcatagatcttggacaagcatttactattaacaaacaaattttgaattcagctttc
tttcctgctgttgttctcaagaatgctgaaatggcattcaattttggtgaaactgaactg
aaatatccactacctcctaattataaacctatttgtcaagccaatgagtcggagatagca
ataaattcaaatgaagaagcttctgatccatgtagtgctcctattcaaaagagcaatgcc
ccacaagctattattatcgagcctagtagagaattagcagaacaaacttgtgatcaactc
aaaaagttcaagaaatatcttgaaaacccaaaaattaaagagctccttgtaattggagga
gtgaatgtgaaagatcagatatctcaattgcaaaatgagggtgcagatataattgtagga
acaccaggaaggttagaggatcttatccaaggaggctatttatctttatctagttgtcgg
ttttttattctggatgaggctgatggtttattgaaacagggttatactgatctcatagaa
agacttcatagacaaatgcctaaaataacaggagatggtaaacgacttcaaatgatagta
tgcagtgcaactcttcatgcttttgaagtgaagaaaatggcagaaaaactcatgtatttt
ccaacatgggttgatctcaagggagaagatgctgttccagacactgttcaccatgttata
gtgaaggttgatcctcagcaagatcgtagttggcataacttgcggcgtcaaatacaaacg
gatggagttcatgctaatgatggtgttcgccctggaaataactgtgctgaaactttgagt
gaggcagtcaaaattttaaaaggagaatattgtgtgcgagctataaatgtccataaaatg
gacagagctataatattttgcaggacaaaaatagattgtgataatttggaaagatatttg
aagaacattgataaaaataaatattcttgtgtttgtctccatggtgataggaaacctcat
gaaaggaaggcgaatttggaaaaattcaagcgacaagaagtgaagttcctgatttgcacc
gatgtagcagctaggggattagatattacaggtttacctttcatgataaatattactctt
cctgatgaaaaatcaaattatgtacatagaattggtcgtgttgggagagctgaaagaatg
ggtttggctttaagtttagtcagtacagtaccagaaaaggtttggtatcacggagaatgg
tgtaaaactagaggacgtaattgttggaatactaatctaactgatgtaaaaggttgttgt
atttggtataatgaaccccagtatttggcagatattgaggaacacttgaacataacaatt
acccaagtggaaactgatatgattgtaccagcagatgaatttgatggcaaagtggtctat
ggacaaaaacgcaaagctggtggatctaactatcagaaccacaccgctcaaatggcacct
atagtaaaagaactaactaaactagaaagtgatgcacaactgatttatctaaataggcac
ctcacaaaattagcaaaagttgcatga
DBGET
integrated database retrieval system
