Harmonia axyridis (harlequin ladybird): 123686973
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Entry
123686973 CDS
T10650
Name
(RefSeq) cleavage stimulation factor subunit 2
KO
K14407
cleavage stimulation factor subunit 2
Organism
haxr Harmonia axyridis (harlequin ladybird)
Pathway
haxr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
haxr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123686973
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haxr03019
]
123686973
Messenger RNA biogenesis [BR:
haxr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
123686973
U7-dependent histone pre-mRNA processing factors
123686973
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
DUF8400
RRM_10
RRM_7
RRM_Rrp7
Motif
Other DBs
NCBI-GeneID:
123686973
NCBI-ProteinID:
XP_045482964
LinkDB
All DBs
Position
1:complement(4175981..4178377)
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AA seq
436 aa
AA seq
DB search
MDNLEANIMDKSMRSVFVGNIPYEATEEKLKDIFGEVGQVLSFKLVFDRETGKPKGYGFC
EYRDQETALSAMRNLNGYEIGGRNLRVDNACTEKSRMEMQNLLNQPPVENPYGEPIQADK
APEAISKAVASLPPEQMFELMKQMKYCIQNNPSEARQMLLQNPQLSYALLQAQVVMKIID
PHTAASMLHPSTPVPPPLMSKDSSMAGPVPISSAFLHQSAPPPRPEFQPVPQVHTIHPNS
QPVFSSQDIDLRSLDIRGPVPDPRMPRMADQDMRSIPGPLPNPLPPPVAENFTRDPRGPG
AAFPADPRGSQTGFPSDPRISSDPRPAPFINDPRQTARVDPRQKAAPLQNPQPVRPPTQI
PPQAPQPVPPRPVAAPASMAAAGANIGPAGASDQEKAALIMQVLQLSDEQIAMLPMEQRS
SILLLKEQIAKSANRT
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggataatttagaagcgaatataatggataagtcgatgcgatcggtcttcgtaggaaat
attccttacgaagccaccgaagagaaattaaaagatatttttggtgaagtcggtcaagta
ttgtcatttaaacttgtttttgatagagaaaccggcaaaccaaagggatatggattttgt
gagtacagagaccaagaaaccgccctgagcgcaatgagaaatttgaatggatacgaaata
ggaggaagaaacctcagggtagacaatgcctgtactgaaaaatctagaatggaaatgcag
aacttgttgaatcagccacctgtggagaatccgtatggtgaacctatccaagcagataaa
gcaccagaagccataagtaaagctgtagcgtctctacctccagaacaaatgttcgaactg
atgaagcagatgaaatactgtatccaaaataatcctagtgaagcacgacaaatgcttctc
cagaatccgcaactatcatatgctttactccaagctcaggttgtgatgaaaataatcgat
cctcatactgctgccagtatgctacacccaagcacacctgttccacctccgttgatgtcc
aaagattcatcgatggcgggacctgtgccgataagtagtgctttcctacatcaatcagcc
ccaccaccgcgcccggagttccaaccagtaccccaagttcataccattcatcccaacagc
caaccagtattttctagtcaagatatagaccttcggtctctggacatcagaggtccagtg
cctgatcccagaatgccaagaatggccgaccaggacatgagaagcatcccgggacctcta
cccaatcccctaccaccgccagtggcggagaatttcaccagggatcccagagggccaggt
gctgcgtttccagctgatccccggggttcccaaactggttttcccagcgatccgaggatt
agcagcgatcccaggcctgctccgttcatcaacgaccccaggcagactgctagggtggac
cctcgacaaaaagctgcccctctgcagaatccgcagcctgttcggccaccaacgcaaata
ccacctcaagctccacagcctgtacctcctagacctgtagctgctcctgcaagtatggca
gcggcaggggccaatataggtccagcaggggcgtctgatcaagagaaagccgcacttatt
atgcaggtgctgcagttgtcagatgaacagattgcgatgttaccgatggaacagagaagt
agtattttgttgttgaaggaacagattgcgaagagtgccaataggacttga
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