Harmonia axyridis (harlequin ladybird): 123687053
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Entry
123687053 CDS
T10650
Name
(RefSeq) collagen alpha-2(XI) chain-like
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
haxr Harmonia axyridis (harlequin ladybird)
Pathway
haxr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
haxr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
123687053
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
haxr00536
]
123687053
Glycosaminoglycan binding proteins [BR:
haxr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
123687053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_3
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
123687053
NCBI-ProteinID:
XP_045482970
LinkDB
All DBs
Position
1:complement(4239337..4300939)
Genome browser
AA seq
1724 aa
AA seq
DB search
MIWLQDGWFIFTSILLLVTQNAHADNDIVDLLEKADLSPSPPGVTRTSGRCYNETVTAAP
LNRSYRFDGNSEVILGANDTFPGGFPQNFSILISAKLDEGQTTSVFTLYSDEGEEVLSVI
LGREITLFYDDDTGPDDGNMISFDGNTDDGEWHRLAFSVKGDSVTMIHNCEISSTRPIVR
STSSTLATSGIITIAHELAEDNHFKGEIELLKIAPVPDEAYDICKTHAPDCSSGIYSNFA
IPSQASSSSEDSSNFGYNLSANGGAGNETQGEGDEFEVTPSIDIFPTHSAPSVVYIPEIS
APTPFYYDYEEGEVDTTIRTSTLSIYPTNSPETTTIENVETTTVTNEGNSTEPKTTTDYY
HGYYDHYYPNYYGAIGPKGDPGRDGMPGTPGVQGPPGHIFMIPINAQGNEKGPDSQAETF
RHMLAQHMMSMRGSEGPVGLTGVPGLQGPPGPEGVKGEPGEVGEMGPRGIQGPLGPPGRE
GRRGRPGRDGERGLAGPPGDKGEQGSPGLPGLPGEKGDRGETGAVGQPGLPGHDGQQGEE
GPPGLPGLSGEMGPRGFSGPRGIPGLPGPPGIPGNEGPPGLKGNAGAPGQSGSPGQSGPP
GPVGSPGPQGSLGPPGVIGPPGKPGFPGIPGIDGPPGPTGKPGSPGSKGDTGPQGFPGQI
GFPGARGFKGDVGLRGSPGEKGEKGDRGFEGEKGEPGPKGNLGASGPPGIPGLEGVEGPK
GSDGPRGEAGTMGLPGEKGNMGLPGFPGYSGATGEKGDKGSTGRAGPAGEKGDRGLTGAA
GERGETGPRGFRGQRGRRGLYGQPGSKGDTGQPGSVGPPGERGVQGPEGPRGFSGAPGPV
GPNGKNGQSGPPGERGAPGEPGSTGPAGAPGVIGPPGPTGEVGAIGEPGPPGPPGPPGEA
GTPGESGKEGPPGLPGPEGKPGVTGPTGLPGFPGERGQSGIPGTPGMKGDMGPPGLPGSI
GDKGQQGESGKDGSPGPEGRQGPPGPPGAGGAKGERGEAGPPGPTGRDGFPGARGLPGPQ
GPIGTPGEDGDKGDLGPPGEKGFKGSAGEAGPAGSPGPQGPRGEPGAPGLNGEKGPPGEI
GRQGTKGEAGPQGPTGPAGPAGLQGLPGPPGVKGEHGDVGMKGPLGPPGPPGEPGLRGEK
GVEGLVGPTGPEGPQGMKGDSGAPGIQGTPGLPGKDGERGAQGQKGEDGKTGPQGPPGGR
GLPGPEGPKGNAGPPGFPGPPGEPGLLGPKGEPGANGEDGRAGEAGPAGERGPPGEMGPV
GAPGKPGMEGPAGSQGNPGPAGEKGDKGMIGAPGLQGIVGPQGMPGSQGLPGLRGSPGSA
GDIGPPGNPGASGPVGKVGAAGERGPKGDTGKQGPKGHQGNIGIPGVKGDMGEKGERGTK
GEPGPVGSKGDTGPVGPIGLKGNDGPPGLPGMEGPPGPKGSDGQTGMKGEMGPSGPPGPP
GPPAEMPLLPPEMLFRNELVRRRRDLDSLINEYQETVDSTKKENPDEEEEAPTNDLSRKF
LDMYNNIYSMRSDLERYRKPLGTKDNPAKSCKDLHFAHPQFKDGWYWLDPNGGMIDDAIN
VFCNMTADGETCVYPDSHSRNMPNIPWSREGSKNDWYSNLRGGFRITYETTGSVQLTFLR
LSSEIGYQNFTYSCINSVAWYNANSKKHDLAVKFRGFNEQEFSHNKLKPDVLMDGCQSRK
EKSESVFEVRTTRLYQLPLIDFYPVDYGGHNQAFGFTVGPVCFK
NT seq
5175 nt
NT seq
+upstream
nt +downstream
nt
atgatatggctccaagatggatggttcattttcacgtcaattctgctcctcgtaacccaa
aacgcccacgcagataacgatatagtggacctcttagaaaaagctgacctatcaccttcg
ccacctggcgttacaagaacctcgggaagatgctacaacgaaactgttacagcagctcct
ctgaacagatcttaccgcttcgatggcaattctgaagttatcctaggcgccaatgatact
tttccaggtggattccctcaaaatttttcgattttgatatctgcaaaattggatgaaggc
caaaccacctccgttttcaccctttactccgatgagggtgaagaagtcctctcagtcatc
ttgggtagagaaataacccttttctacgatgacgatacgggtccagacgatgggaacatg
attagcttcgatggaaataccgatgatggagaatggcatcgtctagccttcagtgtgaaa
ggagactctgtaacaatgatacacaactgtgagatatcttcaacaagaccaatcgtaaga
tcaacatcctcaacgttggctacatctgggattatcacgattgctcatgaacttgctgaa
gataatcatttcaagggcgagatcgaactcctgaagatagctccagtgcctgacgaagcc
tacgatatatgtaagacacacgcacctgattgctcctcggggatctacagcaatttcgcc
attccctctcaggcttcttcctcctcggaagactcctcgaacttcggatacaacttgtct
gccaacggaggggcggggaacgagacgcaaggggaaggcgatgagtttgaagtcacccca
tccattgacatttttccaactcattcagcaccttccgtagtttatataccagaaatttca
gcacctacacctttttattatgactatgaagaaggagaagtagacacaactatcagaacc
agcactctatccatctaccctacgaatagcccagagacgactaccattgaaaacgtagag
acaacaactgtaactaatgaaggcaattcgactgaacctaagaccacaacggattattat
catggctactacgatcactattaccccaattactacggtgctatcggacctaaaggagac
cctggacgagacggtatgcctggtacgcctggggtacaaggtcctccaggacatatattc
atgattcctataaacgctcaaggcaacgaaaagggtccagactcgcaggcagaaactttc
aggcacatgcttgcacagcatatgatgtccatgcgaggatctgaaggaccagttggtcta
actggagttccaggtttacaaggaccacctggaccagaaggtgtcaaaggagaacctggg
gaagttggagaaatgggacctcgtggtattcaaggccctctaggcccaccaggaagagaa
ggtcgcagaggtcgtcctggtagagacggagaaaggggtcttgccggtcctccaggcgac
aaaggagaacaaggttcgcctggactaccaggtcttccgggtgaaaaaggtgacagggga
gaaaccggagccgtaggtcaacctggacttcctggacacgacggccaacagggcgaggaa
ggacctccaggtctacccggactttcgggagaaatgggacctagaggattttcaggacct
aggggtattcccggtttgcctggccctccaggtattccgggtaacgaaggacctccagga
ctgaagggtaacgcaggtgctccgggtcaatcaggatcccctggacaatctggacctcct
ggacccgtaggctctccaggacctcaaggttccttaggaccccctggagtaattggacca
ccaggaaaaccgggttttcctggtatacccggaatagatggcccaccaggtcctacaggt
aaaccaggatccccaggaagcaaaggcgatacaggaccccaaggctttccaggacaaatt
ggttttccaggagcgagaggtttcaagggtgatgtaggtttgcgaggatctcccggagag
aagggtgagaagggagatagaggtttcgaaggtgaaaagggggaacctgggcctaaagga
aatttgggagcatctggacctccaggtattcctggattggaaggtgtggaaggaccaaag
ggaagtgatggaccacgtggtgaagctggaactatgggtcttcctggagagaaaggaaac
atgggactccctggatttcctggttactctggagctaccggagagaagggagacaaaggt
tcaacgggaagagcaggacctgctggtgagaagggagataggggactaaccggtgcagca
ggagaaaggggagaaacaggaccaagaggcttcagaggtcaaaggggcagaagaggtttg
tacggccagccaggatctaagggagacaccggccaacctggatctgtaggtcctcctggc
gaaagaggagtgcaaggcccagaaggtcctagaggtttcagtggagcaccgggtcctgta
ggtccaaacggaaaaaacggacagtctggaccacctggtgaacgtggtgcaccgggtgaa
ccgggcagcaccggtcctgcgggggcaccaggagtcattggaccacctggacctacaggg
gaagttggagcaataggagaaccaggacctccaggtccaccaggtccacctggtgaagct
ggaacgccgggggaatcaggcaaagaaggtcctccaggtttgcctggacccgagggaaaa
ccaggagtgacaggtcccactggactccctggatttcctggggaaagaggtcaaagcgga
attccgggtacccctggaatgaaaggtgacatgggacctccaggacttccaggcagcata
ggagacaaaggacaacaaggcgaatcgggaaaggacggatcaccaggtcctgaaggcagg
caaggtccacccggtcctccaggtgctggaggagcgaaaggagaaagaggagaggcaggt
ccacctggtccgaccggtagagatggttttccaggtgccagagggcttcctggaccacaa
ggtcctataggaactcctggagaagatggtgataagggagatttgggaccgcctggggag
aagggattcaaggggtccgcaggagaagccggaccagcaggaagtcctggtccacaagga
ccccgtggagaacccggtgctccagggcttaacggcgaaaaaggaccaccgggagaaatc
ggcagacaaggaactaaaggcgaggccggacctcagggtcccaccggaccggcaggtcct
gcaggtttgcaaggtttaccgggacctccaggtgtgaaaggtgagcacggagacgttggt
atgaagggtcctttgggaccaccaggccctcctggtgaaccgggcttaaggggagaaaaa
ggagtggaaggattggtgggacctactggtcccgagggtcctcagggaatgaagggagat
tctggagcgcctggtattcagggaactcctggactgcctggaaaagatggagaaagaggt
gctcaaggacagaaaggcgaggacggtaagaccggacctcaaggacccccaggaggcaga
ggacttcccggacccgaaggtccaaaaggcaatgcgggacccccaggttttccaggacca
cctggtgaaccaggcctgttgggacccaagggcgaacctggagctaacggcgaagatgga
agagctggagaagctggacctgctggtgagagaggaccaccaggtgagatggggccagta
ggagcaccaggtaaaccgggaatggaaggacccgcaggatcacaaggaaacccaggaccc
gctggagaaaagggagataaaggaatgatcggagcacccggtttacaaggtatcgtcggg
ccacaaggaatgccaggatcccaagggcttccaggactacgagggtctccaggatcagct
ggagatatcggacctccgggaaatccaggagcttcaggacctgttggtaaggtaggagct
gcaggagagagaggacctaaaggtgacactggtaaacaaggtcccaaaggacatcaaggt
aacattggtattccgggagttaagggagacatgggagagaagggagaaagaggaactaag
ggagaacctggtccagttggatctaaaggtgacacgggacctgttggtccaatcggtctg
aaaggaaacgacggtcccccaggtctacctggaatggagggtccaccaggtcccaaaggt
tcagacggccaaaccggaatgaaaggagaaatgggaccttccggaccaccaggacctcct
ggacctcctgcagagatgccgttgttaccgccggagatgctgttcagaaacgagttggtc
aggagaagaagagatcttgacagtttgattaacgaataccaagaaaccgtggactcgacc
aagaaggagaatccagacgaagaggaagaagcacctaccaacgatctgagcaggaagttc
ttagatatgtacaacaacatctacagcatgcgcagtgacttggaaaggtacaggaagcct
ctagggaccaaagacaaccccgccaagtcctgcaaagaccttcacttcgcccatcctcaa
ttcaaagatggttggtattggttagaccccaatggtggcatgatagacgatgccatcaac
gtcttctgcaatatgacagctgacggagagacctgcgtgtatccagacagccacagcagg
aatatgccgaacatcccttggagcagggagggcagtaagaacgattggtattcgaatttg
agggggggattcaggatcacatatgaaacaactggcagcgtccagttaacattcctccgc
ttgagctctgagatcggctaccaaaatttcacctacagctgtatcaacagcgtggcttgg
tacaacgcgaacagtaaaaaacacgacttggctgtgaaattcagaggcttcaatgagcag
gaattttctcacaacaaactaaaaccggatgttctgatggatggctgtcagagtagaaaa
gagaagagcgagagcgttttcgaagttcgaaccaccagattgtaccagttacctctcata
gatttttatccagtggattacggtggacataaccaagcttttggattcactgttgggcca
gtttgtttcaaatag
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