Harmonia axyridis (harlequin ladybird): 123688593
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Entry
123688593 CDS
T10650
Name
(RefSeq) SWI/SNF complex subunit SMARCC1-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
haxr Harmonia axyridis (harlequin ladybird)
Pathway
haxr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
haxr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123688593
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haxr03021
]
123688593
03036 Chromosome and associated proteins [BR:
haxr03036
]
123688593
Transcription machinery [BR:
haxr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
123688593
Chromosome and associated proteins [BR:
haxr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
123688593
PBAF complex
123688593
GBAF(ncBAF) complex
123688593
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
SpeFL
Motif
Other DBs
NCBI-GeneID:
123688593
NCBI-ProteinID:
XP_045483137
LinkDB
All DBs
Position
1:complement(83582591..83585340)
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AA seq
574 aa
AA seq
DB search
MSKALLKPTRRKNTKASTPNPKRFKPSLEQNDHIPDVEIIVPDLPKEEVNISEKLTENLV
EKLEDPLEDKTVSEEKNEADDKEKTSDNEKAVEYEREKLRSPLKLEDGLFFDDDDKVIEQ
THHIIIPSYSTWFDYDSINELEKRSLSEFFNSRNKSKTPEVYLAYRNFMIDTYRLNPTEY
LTSTACRRTLAGDVCAIMRIHAFLEQWGLINYQLESNSKPSEMCPPHTSHFHVLSESPSG
LQNVSAPRTSISDSKKVMLDLDNHSTEGNLNIGQLGLKLDQYAAKSKKHSKAAREAMRCW
TEQETLLLLEAIEMFKDDWNKVAEHVGSRTQDECILHFLRLPIEDSFLDKLPNGPLNFQP
IPFSKSGNPVLSIIAFLASIVDPKVVSVATESAIKLYNKMKDEEIPHQVVEDHLKRIRES
KFEGMFDPNYRLEETGIYGTNPNECSEMNVEENSEKVNDDGPTIKVEGDGQKDIETAAVQ
ALVAAALKAKKLADAEEQKMKGLIQLLIETQMKKFELKLQQFKELELMLVKEKETLEYQK
QQLITERQSFHLEQLEVAEQRAKQQAQLKLHQNE
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaggccctattgaaacctactagaagaaaaaatactaaggcatcaactcccaat
ccaaaaaggttcaaaccttctttggaacaaaatgatcatattcctgatgtggaaataata
gtgccagatttacctaaagaggaagtaaatatttctgaaaaactgaccgaaaacctcgtt
gagaaactagaagatcccctagaagataaaacggtatctgaagaaaagaatgaagctgat
gacaaagaaaagacatccgacaatgaaaaggcagtagaatatgagagggaaaaactgagg
tcacctcttaaattagaggacggcctttttttcgatgatgatgacaaagtaattgagcaa
actcatcatataatcattccttcctactcgacatggtttgattatgactcaataaatgaa
ttagagaaaagaagtttatctgaattctttaatagtcgcaataagtccaaaacaccagaa
gtgtatctggcatataggaattttatgattgatacttatcgcttgaacccaactgaatac
ctcacaagtactgcttgcagaagaaccctagcaggagatgtttgtgcaataatgagaata
catgcttttctagaacaatggggattaatcaattatcagttagaaagtaatagtaaacct
tcagaaatgtgtcctccacatacatcacatttccacgttttatcagaaagtccatctgga
ttacaaaatgtcagcgccccaagaacatccatcagtgattctaagaaggtaatgctagac
ctagataatcattccacggagggtaacttgaatattggccaactaggattgaaattagat
cagtatgctgctaaatctaagaaacacagcaaagcagcacgtgaagccatgcgatgttgg
acagagcaagaaacgctgctgcttttagaggccattgaaatgttcaaagatgactggaat
aaggttgctgaacatgttggatccaggacacaagacgagtgcatattacattttttgaga
cttcctatcgaagattcctttttggataaacttccaaacggtccgttgaattttcaaccc
attccattcagcaaatcaggtaaccctgttctgtctatcattgcatttttagcgtccatc
gtcgaccctaaagtagtatcagttgcaacagaaagtgccataaagttatataataaaatg
aaagatgaagaaattccgcatcaagttgtggaggatcacttgaagaggatcagggagtct
aaattcgagggtatgttcgatcctaactatcggttggaggagacgggtatttacgggacg
aatccaaacgaatgttcagaaatgaatgtagaggaaaactctgaaaaggtaaatgatgac
ggtcctacgattaaagtagagggagatggccagaaagacatagagactgctgcagttcaa
gctctggtagcggctgcactcaaagctaaaaaactggcagatgcggaagaacagaagatg
aagggactgattcagctcctcatcgagacacaaatgaaaaagttcgagctgaaattacag
cagttcaaagaactggagttgatgcttgtgaaagagaaagagactttggaatatcaaaaa
cagcaattgatcacagaacgccaaagttttcacttggagcaattggaagttgctgaacag
agggctaaacaacaagctcagttgaaacttcaccaaaatgagtaa
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