KEGG   Halorussus vallis: NGM07_02915
Entry
NGM07_02915       CDS       T09372                                 
Name
(GenBank) transcription factor
  KO
K03136  transcription initiation factor TFIIE subunit alpha
Organism
haxy  Halorussus vallis
Pathway
haxy03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:haxy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    NGM07_02915
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:haxy03021]
    NGM07_02915
Transcription machinery [BR:haxy03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIE
     NGM07_02915
 Prokaryotic type
  Archaeal type
    TFE
     NGM07_02915
SSDB
Motif
Pfam: TFIIE_alpha Sigma70_r3 Rad50_zn_hook DNA_ligase_ZBD Zn_ribbon_6 DUF7129 HypA Zn_ribbon_TFIIB Zn_ribbon_3 Zn_ribbon_8
Other DBs
NCBI-ProteinID: USZ76286
LinkDB
Position
complement(541746..542282)
AA seq 178 aa
MAFEDLLEDPVIQKYLHELVGPKGMPVAAAPPDGEVTDEELAEELDLELNDVRRALFILY
ENDLATYRRLRDEDSGWLTYLWTFEYDNIPGNLEEEMHRLLDALEQREDYERQHEFYLCE
VCSIRFEFGEAMDFGFECPECGSPLESMENSRLVEAMERRIAELRDELNVEHLEEAEA
NT seq 537 nt   +upstreamnt  +downstreamnt
atggcttttgaggacttactggaggacccggtaattcagaagtatcttcacgaattggtc
ggtccgaagggaatgcccgtcgcggcggccccgccggacggcgaggtcaccgacgaggaa
ctcgccgaggaactcgacctcgaactcaacgacgtgcgccgggcgctgttcatcctctac
gagaacgacctggcgacgtaccgccgcctgcgcgacgaggactcggggtggctgacgtac
ctctggacgttcgagtacgacaacatcccgggcaacctcgaagaggagatgcaccgcctg
ctcgacgcgctcgaacagcgcgaggactacgaacgccagcacgagttctacctctgtgag
gtgtgttcgatccgcttcgagttcggcgaggcgatggacttcggcttcgagtgccccgag
tgcgggtcgccgctcgaatcgatggagaactcccgactcgtggaggcgatggagcgacga
atcgcggaactgcgagacgaactcaacgtcgaacacctcgaagaggcagaagcatag

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