Halorussus vallis: NGM07_02915
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Entry
NGM07_02915 CDS
T09372
Name
(GenBank) transcription factor
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
haxy
Halorussus vallis
Pathway
haxy03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
haxy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NGM07_02915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haxy03021
]
NGM07_02915
Transcription machinery [BR:
haxy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
NGM07_02915
Prokaryotic type
Archaeal type
TFE
NGM07_02915
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Sigma70_r3
Rad50_zn_hook
DNA_ligase_ZBD
Zn_ribbon_6
DUF7129
HypA
Zn_ribbon_TFIIB
Zn_ribbon_3
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
USZ76286
LinkDB
All DBs
Position
complement(541746..542282)
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AA seq
178 aa
AA seq
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MAFEDLLEDPVIQKYLHELVGPKGMPVAAAPPDGEVTDEELAEELDLELNDVRRALFILY
ENDLATYRRLRDEDSGWLTYLWTFEYDNIPGNLEEEMHRLLDALEQREDYERQHEFYLCE
VCSIRFEFGEAMDFGFECPECGSPLESMENSRLVEAMERRIAELRDELNVEHLEEAEA
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgaggacttactggaggacccggtaattcagaagtatcttcacgaattggtc
ggtccgaagggaatgcccgtcgcggcggccccgccggacggcgaggtcaccgacgaggaa
ctcgccgaggaactcgacctcgaactcaacgacgtgcgccgggcgctgttcatcctctac
gagaacgacctggcgacgtaccgccgcctgcgcgacgaggactcggggtggctgacgtac
ctctggacgttcgagtacgacaacatcccgggcaacctcgaagaggagatgcaccgcctg
ctcgacgcgctcgaacagcgcgaggactacgaacgccagcacgagttctacctctgtgag
gtgtgttcgatccgcttcgagttcggcgaggcgatggacttcggcttcgagtgccccgag
tgcgggtcgccgctcgaatcgatggagaactcccgactcgtggaggcgatggagcgacga
atcgcggaactgcgagacgaactcaacgtcgaacacctcgaagaggcagaagcatag
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integrated database retrieval system