KEGG   Halorussus vallis: NGM07_03130
Entry
NGM07_03130       CDS       T09372                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
haxy  Halorussus vallis
Pathway
haxy03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:haxy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NGM07_03130
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:haxy03019]
    NGM07_03130
Messenger RNA biogenesis [BR:haxy03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     NGM07_03130
SSDB
Motif
Pfam: Lactamase_B_2 Lactamase_B RMMBL
Other DBs
NCBI-ProteinID: USZ76328
LinkDB
Position
582261..583613
AA seq 450 aa
MEIEIATIGGYEEVGRQCTAVRAGEDVVIFDMGLNLSKVLLHDNVETEKLHSLDLIDMGA
IPDDRVMSDLEGDVQAIVPTHGHLDHIGAISKLAHRYNAPVVATPFTIELVKQQIQGEQK
FGVENDLIKMDPGETMSIGDSGQVELEFVNVTHSIIDAINPVLHTPEGAVVYGLDKRMDH
TPVLGDPIDMKRFREIGREGEGVLAYIEDCTNAGRKGRTPSEAVARRHLKDVMTSIEDYD
GGIVATTFSSHIARVKSLVEFAHDIGREPVLLGRSMEKYSGTAERLNFVDFPENMGMFGH
RKSVDRTFKRIMKEGKENYLPIVTGHQGEPRAMLTRMGRGETPYELDNGDKVLFSARVIP
EPTNEGQRYQSERLLKMQGARIYDDIHVSGHLREEGHYQMLDALQPQNVIPAHQDMKGFA
PYVDLCENMGYQLGRDLHVTRNGNLIQLVE
NT seq 1353 nt   +upstreamnt  +downstreamnt
atggaaatcgaaattgcaaccatcggcggttacgaagaagtcggacggcagtgtactgcc
gttcgcgcgggcgaggacgttgtcatattcgacatggggctgaacctctcgaaggtactg
ctccacgacaacgtcgagaccgagaaactgcacagtctggacctcatcgacatgggggcg
attccggacgaccgcgtaatgagcgacctcgaaggcgacgtgcaggccatcgtcccgact
cacggtcacctcgaccacatcggcgccatctcgaaactggcccaccggtacaacgcgccg
gtcgtcgccacgcccttcaccatcgaactggtcaaacagcagatacagggcgagcagaag
ttcggcgtcgagaacgacctgataaagatggaccccggcgagacgatgtccatcggcgac
tccggccaggtcgaactggagttcgtcaacgtcacccactccatcatcgacgccatcaac
ccggtgctccacacgcccgagggcgcggtcgtctacggcctcgacaagcgcatggaccac
acgcccgtgctgggcgaccccatcgacatgaagcggttccgcgagatcggccgcgagggc
gagggcgtcctggcgtacatcgaagactgcaccaacgcgggccggaagggccgcaccccc
agcgaggcggtggctcggcgccacctcaaggacgtgatgacctccatcgaggactacgac
ggcggcatcgtggcgacgacgttctccagccacatcgcccgcgtcaagagcctcgtcgag
ttcgcccacgacatcgggcgcgaaccggtgttgctcggccggtcgatggagaagtactcc
ggcaccgccgagcgactgaacttcgtcgacttccccgagaacatggggatgttcggccac
cgcaagtcggtcgaccggaccttcaagcgcatcatgaaggagggcaaggagaactacctg
cccatcgtcaccggccatcagggcgaaccccgcgcgatgctcacccggatgggccgcggc
gagacgccgtacgaactcgacaacggcgacaaggtcctcttctcggcgcgggtgattccg
gagccgaccaacgagggccagcgctaccagtccgagcgcctcctcaagatgcagggcgcc
cgcatctacgacgacatccacgtctcgggccacctccgcgaggagggccactaccagatg
ctcgacgcgctccagccccagaacgtcatcccggctcaccaggacatgaagggcttcgcg
ccctacgtcgacctgtgtgagaacatgggctaccaactgggtcgggatctgcacgtgacc
cgaaacggcaatctcatccaactcgtcgagtaa

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