Halorussus vallis: NGM07_03405
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Entry
NGM07_03405 CDS
T09372
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
haxy
Halorussus vallis
Pathway
haxy03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
haxy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NGM07_03405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haxy03021
]
NGM07_03405
Transcription machinery [BR:
haxy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
NGM07_03405
Prokaryotic type
Archaeal type
TFB
NGM07_03405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Lar_restr_allev
Cas12f1-like_TNB
Zn_ribbon_Elf1
Ribosomal_S27e
Motif
Other DBs
NCBI-ProteinID:
USZ76381
LinkDB
All DBs
Position
complement(633240..634208)
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AA seq
322 aa
AA seq
DB search
MERTRQRHPHENHAEREQKQDAEQRQTCPECDAANLVKSADGTELTCEDCGLIIEETNVD
RGPEWRAFNHAERQEKSRVGAPTTNTMHDKGLTTSIDWKDKDAYGNSLSSEKRSQMNRLR
KWQNRIRTKDAGERNLQFALSESDRMASGLGVPRSVREVASVIYRRALNEDLIRGRSIEG
VATATLYAACRKEGIPRSLEEVTAVSRVEQKEIGRTYRYISKELGLEMVPVDPKQYVPRF
CSELDLPEEVQAKTNEIIDKSAEAGLLSGKSPTGFAAAAIYAASLLCNEKKTQREVSEVA
QVTEVTIRNRYQEQIEAMGLHG
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggagagaacccggcagcgtcacccccacgagaaccatgcagaacgagagcagaaacag
gacgctgaacaacgccaaacgtgtccagaatgcgacgctgccaacctcgtcaagagcgct
gacgggactgaactcacgtgtgaggactgtggactcattatcgaggaaaccaacgtcgac
cggggaccggagtggcgagcgttcaaccacgccgaacggcaggagaagtctcgtgtgggt
gccccaaccacgaacacgatgcacgataaggggctgacgacgtccatcgactggaaggac
aaggacgcctacgggaactcgctctcctcggaaaaacgcagtcagatgaaccggctccga
aagtggcaaaaccgcatccgaaccaaggacgcgggagaacggaatctccagtttgcgctc
tcggagtccgaccgcatggcctccgggttgggtgtcccccgatcagtcagagaagtcgcc
agcgtcatctaccgacgggcactcaacgaggatctcatccgtgggcggtcgatcgagggt
gtagccactgccacgctctatgcagcctgtcggaaggaagggattccgcggtcactcgaa
gaggtcacagcggtttcgcgtgtcgagcaaaaggagatcgggcgcacgtatcggtacatc
tcgaaggaactcgggttagagatggtgcccgtcgaccccaagcagtacgttccccggttc
tgttcggagctggacctccctgaggaggtgcaggccaagacgaacgaaatcatcgacaag
tctgccgaggcggggctcctatcaggtaaatcaccgacgggcttcgccgcagcagcgata
tacgccgcgtcactgctctgcaacgagaagaagacccagcgcgaggtttccgaagtcgcc
caagtcaccgaggtcaccatccgaaaccgctaccaggaacagatcgaggcgatgggactt
cacggataa
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integrated database retrieval system
