Halorussus vallis: NGM07_06985
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Entry
NGM07_06985 CDS
T09372
Name
(GenBank) RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
haxy
Halorussus vallis
Brite
KEGG Orthology (KO) [BR:
haxy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
haxy03016
]
NGM07_06985
Enzymes [BR:
haxy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NGM07_06985
Transfer RNA biogenesis [BR:
haxy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NGM07_06985
Prokaryotic type
NGM07_06985
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_C_2
TruB_N
PUA
DKCLD
Pus10_C
CsgH
Motif
Other DBs
NCBI-ProteinID:
USZ77063
LinkDB
All DBs
Position
complement(1340486..1341400)
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AA seq
304 aa
AA seq
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MLRRPPADRSPAELLAFGVVNLDKPPGPSAHQIAGWVRDMAREALTAAEHADAHAELVDQ
AAHAGTLDPKVTGCLPVLTGAATRLSQVFLEGGKEYVAVLELHDDPPGDLEAIVSEFEGP
VYQKPPRKSAVSRRLRVREVYDLDVLEVEGRQTLLRIRCESGTYIRKLCHDLGLALGTGG
HMGHLRRTATDPFDDTTLVTLQDLSDALARWFEDGEDDWLREVVSPAERALAHLPAVTVA
PNAAEEIARGAQVYAPGVIEAEDAEEDELVACLTPNGAAVCLGRMVGDPDAETGVVVELE
RVLV
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgctccgccgacctcccgccgaccggtcgcccgccgaactcttggcgttcggcgtcgtg
aacctcgacaaaccgccggggccctcggcccaccagatcgcggggtgggtccgcgacatg
gcgcgggaggcgttaaccgccgcggagcacgccgacgcgcacgcggaactggtggaccag
gcggcccacgccggaacgctggacccgaaagtcaccggctgtctccccgtcctcaccggg
gcggcgacccgcctctcgcaggtgttcctcgaaggaggcaaagagtacgtcgcggtgctg
gaactccacgacgacccgcccggcgacctcgaagccatcgtctcggagttcgaaggcccg
gtgtaccagaagccgccccgaaagagcgcggtgtcccgccgactccgcgtccgagaggtc
tacgacctcgacgtgttggaggtcgagggacggcagacactgctccggattcgctgcgag
agcggcacctacatccggaagctctgtcacgacctcggcctcgcgctcgggacgggcggc
cacatgggccacctgcgccggaccgcgaccgaccccttcgacgacacgacgctggtgact
ttacaggacctctcggacgcgctggccaggtggttcgaggacggcgaggacgactggctc
cgcgaggtcgtctcgcccgccgagcgcgcgctggcccacctcccggcggtcaccgtcgcg
ccgaacgccgcggaagagatcgcccgcggcgcacaggtgtacgcgcccggcgtcatcgaa
gcggaggacgcggaggaggacgagttggtcgcctgcctcaccccgaatggggccgcggtc
tgtctcgggcggatggtcggcgaccccgacgccgagacgggcgtggtcgtggagttagag
cgcgtgttagtctga
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