Halorussus vallis: NGM07_10000
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Entry
NGM07_10000 CDS
T09372
Name
(GenBank) DNA-directed RNA polymerase, subunit E''
KO
K15171
transcription elongation factor SPT4
Organism
haxy
Halorussus vallis
Pathway
haxy03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
haxy00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
NGM07_10000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haxy03021
]
NGM07_10000
03019 Messenger RNA biogenesis [BR:
haxy03019
]
NGM07_10000
Transcription machinery [BR:
haxy03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
NGM07_10000
RNA polymerase I system
NGM07_10000
Messenger RNA biogenesis [BR:
haxy03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
NGM07_10000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
Zn_ribbon_RRN7
RecR_ZnF
DZR
Zn_Ribbon_1
Zn_ribbon_3
Zn_Ribbon_TF
HypA
zf-P11
zf-C3HC4_3
Zn_ribbon_15
DUF7129
Zn_ribbon_RPB9
TackOD1
Zn_ribbon_PaaD
Motif
Other DBs
NCBI-ProteinID:
USZ77649
LinkDB
All DBs
Position
1972882..1973079
Genome browser
AA seq
65 aa
AA seq
DB search
MASNRLACRECHAVAEADADTCPICGSTSLTEDWSGFVIISHPDKSEIAKEMEVTQPGRY
ALKVR
NT seq
198 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtaaccgtctcgcgtgccgcgagtgccacgccgtggccgaagccgacgccgac
acctgccccatctgcgggtcgaccagcctcaccgaggactggagcggcttcgtcatcatc
tcccacccggacaagagcgagatcgccaaggagatggaagtgacccagcccggccggtac
gcgctgaaggtccgctga
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integrated database retrieval system
