Halorussus vallis: NGM07_10170
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Entry
NGM07_10170 CDS
T09372
Name
(GenBank) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
haxy
Halorussus vallis
Pathway
haxy03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
haxy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NGM07_10170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
haxy03000
]
NGM07_10170
03021 Transcription machinery [BR:
haxy03021
]
NGM07_10170
Transcription factors [BR:
haxy03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
NGM07_10170
Transcription machinery [BR:
haxy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
NGM07_10170
RNA polymerase III system
TFIIIB
NGM07_10170
RNA polymerase I system
SL1/TIF-1B
NGM07_10170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
T4bSS_IcmS
Motif
Other DBs
NCBI-ProteinID:
USZ73825
LinkDB
All DBs
Position
complement(2007800..2008360)
Genome browser
AA seq
186 aa
AA seq
DB search
MTDPKETINIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQNPKSAALIFR
SGKIVCTGAKSTADVHESLEIVFDKLRELQINVNEDPEIVVQNIVTSADLGRNLNLNAIA
IGLGLENIEYEPEQFPGLVYRLDEPEVVALLFGSGKLVITGGKKPEDAEQAVDKIVSRLE
ELGLLE
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgactgacccaaaggagaccatcaacattgaaaacgtggtcgcctccaccggcatcggg
caggaactcgacctccagagcgtggcgatggacctggagggggccgactacgaccccgaa
cagttccccggtctggtctaccgcacccagaaccccaagtcggccgcgctcatcttccgc
tcgggcaagatcgtctgcaccggcgccaagagcaccgccgacgtccacgagagcctcgaa
atcgtcttcgacaagcttcgagagctccagatcaacgtgaacgaggaccccgagatcgtc
gtccagaacatcgtcacctccgccgacctcgggcgcaacctcaacctcaacgccatcgcc
atcggtctcggcctggagaacatcgagtacgaacccgagcagttccccggtctggtctac
cgcctcgacgaacccgaggtcgtcgcgctcctgttcggttcgggcaaactcgtcatcacc
ggcggcaagaagcccgaggacgccgagcaggcggtcgacaagatcgtctcgcggctcgaa
gaactcggtctgctcgaataa
DBGET
integrated database retrieval system
