Halorussus vallis: NGM07_11800
Help
Entry
NGM07_11800 CDS
T09372
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
haxy
Halorussus vallis
Pathway
haxy04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
haxy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
NGM07_11800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haxy03019
]
NGM07_11800
03009 Ribosome biogenesis [BR:
haxy03009
]
NGM07_11800
04131 Membrane trafficking [BR:
haxy04131
]
NGM07_11800
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
haxy04147
]
NGM07_11800
Messenger RNA biogenesis [BR:
haxy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
NGM07_11800
Ribosome biogenesis [BR:
haxy03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
NGM07_11800
Membrane trafficking [BR:
haxy04131
]
SNARE
SNARE associated proteins
Others
NGM07_11800
Autophagy
Aggrephagy
Other aggrephagy associated proteins
NGM07_11800
Exosome [BR:
haxy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NGM07_11800
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
CDC48_2
AAA_5
AAA_2
TIP49
AAA_22
AAA_14
AAA_33
AAA_28
nSTAND3
RNA_helicase
NPHP3_N
IstB_IS21
Mg_chelatase
AAA_7
TsaE
Parvo_NS1
AAA_3
AAA_18
nSTAND_NTPase5
Sigma54_activat
NB-ARC
AAA_lid_PRS2_C
DUF5906
bpMoxR
AAA_30
Zeta_toxin
AAA_24
DUF815
AAA_19
AAA_11
ABC_tran
AAA_25
SLFN-g3_helicase
Vps4_C
Motif
Other DBs
NCBI-ProteinID:
USZ74134
LinkDB
All DBs
Position
complement(2318342..2320594)
Genome browser
AA seq
750 aa
AA seq
DB search
MAEFRVSGLAPQDAGRGIARLTQAGREELGVEPDDVVTITGRRRTVAKVAGSYKGDEADV
VRIDGNVRINADVNVDDSVEVEAVDPEPASSITVALPDYVILRGAEPLIHRYLVDRPVIR
GDTVQMRLLGQPFVFLVTKTSPSGPTVITEETEVRIRETPITEEDLRGRQDALPDITYED
IGGLGRELDLIREMIELPLRHPELFRRLGVAPPKGVLLHGPPGTGKTLIAKAVANEVDAS
FHEISGPEIMSKYYGESEQHLREVFDEAQQDAPAIVFVDEIDSIAPSRDEVTGETERRVV
AQLLSLMDGLEARGDVIVIAATNRPDAIDSALRRGGRFDREIEVGVPGREGRLEVLQIHT
KGMPLADDVDLEELAEHTHGFVGADLASLARESAMHAIRRVQPDLDMDATVIPADVLESI
EVTATDFAEARQEIEPSAMREVYVEVPDVTYDDVGGLDPVKRELVRAVEWPLRYPQLFDK
LRTEAPRGVLLYGPPGTGKTLLARAVANASGVNFISVKGPELLDKFVGESERGVREVFQR
ARQSAPTIIFFDEIDAIALERGGSFDSRVTERVVSQLLTELDGIEALNDVFVMGATNRPD
VIDPALLRPGRLEKNIYVPIPDVDARRAIFAVHTRGVPAADDVDLDALAEETEGYTGGDI
EAIVREASMLAMDEVVLALGGDGEVDETPDEAEIDEAATGLTVSHEHFRAALEKVKPSVT
DDRREFYEEMVNELGGKAQTDADDGGLGFQ
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggccgaattcagggtttccgggctcgcgccgcaggacgcaggacgaggaatcgcgcga
ctgactcaagcgggacgagaggaactgggcgtcgaaccggacgacgtcgtcaccatcacc
ggccgccgccgaaccgtggcgaaagtcgctggtagctacaagggcgacgaggccgacgtc
gttcgtatcgacggaaacgtccgcatcaacgccgacgtgaacgtcgacgattcggtcgag
gtcgaggcggtcgaccccgaacccgcttcgtccatcacggtcgcgctgcccgactacgtc
atcctgcgcggcgcggaaccgctgatacaccgctacctcgtcgaccggccggtcatccgg
ggcgacaccgtccagatgcgactgctcggccaaccgttcgtcttcctcgtgacgaagacg
agtccgtccgggccgaccgtgatcaccgaggaaaccgaagtccgaattcgcgaaaccccg
attaccgaggaggacctccggggccgacaggacgcactcccggacatcacctacgaggac
atcggcggactgggccgcgaactcgacctgattcgggagatgatcgaactcccgctgcgc
caccccgaactgttccggcgtctcggggtcgcaccgccgaagggggtgttactccacggc
ccgcccggcacgggcaagaccctcatcgcgaaggcggtcgcaaacgaggtcgacgccagt
ttccacgagatatccggcccggagatcatgtcgaaatactacggcgagtccgaacagcac
ctccgggaggtgttcgatgaagcccagcaggacgcccccgccatcgtcttcgtcgacgag
atcgactccatcgcgccgagtcgcgacgaggtgaccggcgaaaccgagcgccgtgtggtc
gcccagttgctgtcgctgatggacggcctggaagcccgcggcgacgtcatcgtcatcgcc
gccacgaatcgcccggacgccatcgattcggcgctccggcggggcggccgcttcgaccgc
gaaatcgaagtgggcgtgccgggccgcgaggggcgactcgaggtcctccagattcacacc
aaggggatgccgctggccgacgacgtcgacctcgaagaactcgccgagcacacccacggc
ttcgtcggtgccgacctcgcgtcgctcgcgcgggagtcggccatgcacgcgattcgccgg
gtgcaacccgacctcgacatggacgcgacggtcatccctgccgacgtgctggagagcatc
gaggtgaccgccaccgacttcgccgaggcgcgccaggagatagaaccgagcgcgatgcgg
gaagtgtacgtcgaggtacccgacgtcacctacgacgacgtgggcggcctcgacccggtc
aagcgcgaactggtcagggcggtcgagtggccgctcaggtacccccagttgttcgacaaa
ctccgcaccgaagcaccgaggggcgtgttgctgtacggcccgcccggcacgggcaagacg
ctgctggcgcgggccgtcgccaacgccagcggcgtgaacttcatctcggtgaaggggccg
gaactcctcgacaagttcgtcggcgagtccgagcggggcgtccgcgaggtgttccagcgc
gcccgacagagcgcgcccaccatcatcttcttcgacgagatcgacgccatcgcgctcgag
cgcggcggctcgttcgactcccgcgttaccgagcgcgtggtgtcccaactgctgaccgaa
ctcgacggcatcgaggcgctgaacgacgtcttcgtgatgggagcgaccaaccgcccggac
gtcatcgacccggcgctgttgcgccccggccgactggagaagaacatctacgtgccgatt
cccgacgtcgacgctcgccgcgccatcttcgcggtccacactcggggtgtgccggccgcc
gacgacgtggacctcgacgcgctggccgaggaaaccgaggggtacaccggcggcgacatc
gaggccatcgtccgggaggccagcatgctcgccatggacgaggtggtgctcgcactcggc
ggcgacggcgaggtcgacgagacgccggacgaagcggagatcgacgaggcggcgacgggg
ctcaccgtctcgcacgagcacttccgggcggccctggagaaggtcaaaccgtcggtcacc
gacgaccggcgcgagttctacgaggagatggtgaacgaactcggcgggaaggcccagacc
gacgccgacgacggcggcctcggtttccagtag
DBGET
integrated database retrieval system
