Halorussus vallis: NGM07_12090
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Entry
NGM07_12090 CDS
T09372
Symbol
endA
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
haxy
Halorussus vallis
Brite
KEGG Orthology (KO) [BR:
haxy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
haxy03016
]
NGM07_12090 (endA)
Enzymes [BR:
haxy01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
NGM07_12090 (endA)
Transfer RNA biogenesis [BR:
haxy03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
NGM07_12090 (endA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo_N
tRNA_int_endo
Motif
Other DBs
NCBI-ProteinID:
USZ74184
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Position
complement(2386182..2387198)
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AA seq
338 aa
AA seq
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MDGRLRDDEVVVGGDARQRYYDSSGYGRPLGGQKVALSRVEAAYLLFKGDLESVSGMGFR
EFLASEELVTRFLVYADLRDRGFYLSPDREGWVSAPRSNSDLVVYPRGKGPWDDEVLYRI
RVVGERADVPADQLGDVVLAVVDEESEITYLETERADVRGSSTTDLPSSVPADLLGDRAL
VWDPPAELHDRAFYGQPLADRDADDPRALQLSLVEAAHLADEGVLELDPTAARDRGRDAE
GERFARRLRVYRALREREVVPKTGFKFGADFRTYADVESVDDLGHSECLVRVLALGHDFE
PRDLALDVRLAHGVRKRMVFALTDGERVEWLGVSRLTP
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggacggacgccttcgggacgacgaggtggtcgtcggcggcgacgcccgccagcggtac
tacgactccagcggttacggccgcccgctcggcggacagaaggtcgcgctgtcgcgcgtc
gaggccgcctacctgctgttcaagggagacctcgaatcggtgtcggggatggggttccgc
gagttcctcgccagcgaggaactggtcacgcggttcctcgtctacgccgacctgcgcgac
cgggggttctacctctcgcccgaccgcgaggggtgggtgagcgcgccccggtcgaactcc
gacctcgtggtctacccgcgcggcaagggaccgtgggacgacgaggtgctgtaccggatt
cgcgtcgtcggcgagcgcgccgacgtgcccgccgaccaactgggcgacgtggtgctggcg
gtcgtcgacgaggagagcgagattacctacctcgaaaccgagcgcgccgacgtgcgcggg
agttcgacgaccgacctcccctcgagcgtcccggccgacctgctgggcgaccgcgcgctc
gtctgggacccgcccgccgaactgcacgacagagcgttctacggccaaccgctcgcggac
cgcgacgcggacgacccccgggcgctccagctctcgctggtcgaagcggcccacctggcc
gacgagggcgtcctcgaactcgacccgaccgcggcccgcgaccgcggtcgggacgccgag
ggcgagcggttcgcgcgccgcctccgcgtctaccgggcgctccgcgagcgtgaggtggtt
cccaagaccgggttcaagttcggcgccgacttccggacctacgcggacgtcgagtcggtc
gacgacctgggccactcggagtgtctcgtcagggtgctcgcgctcggccacgacttcgag
ccgcgcgacctcgcgctcgacgtccgactcgcccacggcgtgcgcaagcggatggtgttc
gcgctcaccgacggcgagcgcgtcgagtggctcggcgtctcgcgactgaccccctga
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