Halorussus vallis: NGM07_12910
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Entry
NGM07_12910 CDS
T09372
Symbol
prf1
Name
(GenBank) peptide chain release factor aRF-1
KO
K03265
peptide chain release factor subunit 1
Organism
haxy
Halorussus vallis
Pathway
haxy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
haxy00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
NGM07_12910 (prf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haxy03019
]
NGM07_12910 (prf1)
03012 Translation factors [BR:
haxy03012
]
NGM07_12910 (prf1)
Messenger RNA biogenesis [BR:
haxy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
NGM07_12910 (prf1)
Translation factors [BR:
haxy03012
]
Eukaryotic type
Release factors
NGM07_12910 (prf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
DUF6110
Motif
Other DBs
NCBI-ProteinID:
USZ74342
LinkDB
All DBs
Position
complement(2548398..2549639)
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AA seq
413 aa
AA seq
DB search
MSDDEDGQSDRKKYEFRKVIEDLDSYEGSGTQLVTIYIPEDKQISDVVAHVTQEHSEASN
IKSKQTRTNVQDALTSIKDRLRYYDTFPPDNGMVIFSGAIDSGGGRTEMVTKTLESPPEP
IQSFRYHCDSNFLTGPLEDMMADKGLYGLIVLDRREANVGWLKGKRVEPVKSASSLVPGK
QRKGGQSAQRFARLRLEAIDNFYQEVAEMANDLFVPERGNIDGILVGGPSPTKDEFLDGD
YLHHEIQQKVLGKFDVAYTDESGLHDLVDNAEDVLADAEVMKDKREMEEFFKQLHEGNKA
TYGFEPTRKNLVMGSVDRLLISEDLRKDVVSYECGDKEEFEFIDRRQETPTHTCEDGSEA
EMVEREDAIEFLINIAEQRGTETKFISTDFEKGDQLLSAFGGVAGILRYSTGV
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgacgaggacgggcagtccgacaggaagaagtacgagttccggaaggtcatc
gaggacctcgactcgtacgagggttccgggacccagctcgtcaccatctacatccccgaa
gacaaacaaatcagcgacgtagtcgcccacgtcacccaggagcacagcgaggcgagcaac
atcaagtccaagcagacccggaccaacgtccaggacgcgctgacttccatcaaggaccgc
ctgcgctactacgacaccttcccgccggacaacggcatggtcatcttcagcggcgccatc
gactcgggcggcggccggaccgagatggtcaccaagaccctggagagtccgcccgagccc
atccagtcgttccgctaccactgcgactcgaacttcctgaccggcccgctggaggacatg
atggccgacaagggcctctacggcctcatcgtcctcgaccgccgcgaggcgaacgtcggc
tggctgaagggcaagcgcgtcgaaccggtcaagtcagcgtcctcgctggtgccgggcaag
cagcgcaaaggtggccagtccgcccagcgtttcgcccgcctgcgcctcgaagccatcgac
aacttctaccaggaggtcgccgagatggccaacgacctgttcgtccccgagcgcgggaat
atagacggaatcctcgtcggcggcccctcgccgaccaaggacgagttcctcgacggcgac
tacctccaccacgagattcagcagaaggtgctgggcaagttcgacgtcgcctacaccgac
gagtcgggcctccacgacctcgtcgacaacgccgaggacgtgctggccgacgccgaggtg
atgaaggacaagcgggagatggaggagttcttcaaacagctccacgagggcaacaaggcg
acctacggcttcgagccgacccggaagaacctcgtgatggggtcggtcgaccgcctgctc
atctccgaggacctccgcaaggacgtcgtcagctacgagtgcggcgacaaagaggagttc
gagttcatcgaccgccgccaggagacgccgacccacacctgcgaagacggctccgaggcc
gagatggtcgagcgcgaggacgccatcgagttcctcatcaacatcgccgagcagcgcggc
accgagacgaagttcatctccaccgacttcgagaagggcgaccagttgctgtcggcgttc
ggcggcgtcgccggcattctgcggtactcgacgggcgtctaa
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