Halorussus vallis: NGM07_13065
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Entry
NGM07_13065 CDS
T09372
Name
(GenBank) transcription initiation factor IIB family protein
KO
K03124
transcription initiation factor TFIIB
Organism
haxy
Halorussus vallis
Pathway
haxy03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
haxy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NGM07_13065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haxy03021
]
NGM07_13065
Transcription machinery [BR:
haxy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
NGM07_13065
Prokaryotic type
Archaeal type
TFB
NGM07_13065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
RB_B
DZR_2
HTH_3
zf_Rg
Zn_ribbon_3
Motif
Other DBs
NCBI-ProteinID:
USZ74372
LinkDB
All DBs
Position
complement(2584082..2584960)
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AA seq
292 aa
AA seq
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MSKAHAEPACPECDGRLTPERDETVCADCGLVVAEDRIDRGPEWRAFADDETEKERTGAP
LTRSRHDRGLTTEIGHGGNGDLRLTGRKRRQVTRMRREHERARISSKAERNQVYAFTEIR
RLVSALQLPRTIRDRACVLFESAQSEDLLRGRSLEGFAAAAVYATCRTDSVSRTLEEVLK
NARADRAELTVAYDALNRELGLPTGPIDPREYLARFASRLGLPVEVENRAGELVERGHEE
NLVSGRDPSGFAAACLYTAAREAGRHLTQREAADVADVTPVTLRSTFYDLQE
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagcacacgccgaacccgcctgtcccgagtgcgacggccgactgacccccgag
cgcgacgaaaccgtctgcgccgactgcggcctcgtggtcgccgaggaccgcatcgaccgc
ggtccggagtggcgcgcgttcgccgacgacgaaaccgagaaggagcggaccggcgcgccc
ctgacccgctcgcgccacgaccgcgggctgacgaccgagatcggccacggcggcaacggc
gacctccgactgacggggcgcaagcgccggcaggtcacgcggatgcgcagggaacacgaa
cgcgcgcgaatctcctcgaaggccgagcgaaatcaggtgtacgccttcaccgagattcga
cggctggtttcggccctccagttgccccggaccatccgggaccgcgcctgcgtcctcttc
gagtcggcccagtcggaggacctgctccgcgggcggtcgctggaggggttcgcggccgcc
gcggtgtacgccacctgccgcaccgactcggtttcgcggacgctcgaagaggtcctgaag
aacgcccgcgccgaccgcgccgaactcacggtcgcctacgacgccctgaaccgcgaactg
ggtctgccgaccggcccaatcgacccccgcgagtacctggcacggttcgccagcaggctc
ggcctcccggtcgaagtcgagaaccgagcgggcgaactggtcgagcgcggccacgaggag
aacctcgtctcgggcagagaccccagcggcttcgccgcggcctgcctctacaccgcggcg
cgggaggccgggcggcacctgacccagcgcgaggccgccgacgtggccgacgtgaccccc
gtgacgctccgctcgacgttctacgatttgcaggaatag
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