Halorussus vallis: NGM07_17195
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Entry
NGM07_17195 CDS
T09372
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
haxy
Halorussus vallis
Pathway
haxy03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
haxy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NGM07_17195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haxy03021
]
NGM07_17195
Transcription machinery [BR:
haxy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
NGM07_17195
Prokaryotic type
Archaeal type
TFB
NGM07_17195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
A2L_zn_ribbon
DZR_2
Trm112p
Anti-TRAP
HTH_Tnp_ISL3
Zn_ribbon_tTFIIB
Zn_ribbon_LysW
Motif
Other DBs
NCBI-ProteinID:
USZ75156
LinkDB
All DBs
Position
3397135..3398097
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AA seq
320 aa
AA seq
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MTDTRIRTRQSEEEVTEETESGTACPECSGKLISDSEHGETVCQDCGLVVEEDNVDRGPE
WRAFDAKEKNEKSRVGAPTTNTMHDKGLSTNIDWRDKDAYGNSLGSRQREKMQRLRKWNE
RFRTRDSKERNLKQALGEIDRMASALGLPNNVRETASVIYRRALDEDLLPGRSIEGVSTA
CVYAAARQAGVPRSLDEIGDVSRVEKSEVARTYRYVVRELSLEVKPADPESYVPRFASGL
GLSDEAEHRARELLRTAKEQGVHSGKSPVGLAAAAVYAAALLTNEKTTQAEVSDVADISE
VTIRNRYHELLEAEEAPAAI
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatacgcgcatacgaactcgacagtcggaggaagaggtaaccgaagaaaccgag
agcggtaccgcctgccccgagtgcagcggaaagctcatcagcgacagcgaacacggtgaa
accgtctgccaggactgcggtctggtcgtcgaagaggacaacgtcgaccgcggccccgag
tggcgcgcgttcgacgcgaaggagaagaacgagaagtcgcgggtcggcgcgccgaccacg
aacacgatgcacgacaagggactgtcgaccaacatcgactggcgtgacaaggacgcctac
ggtaactcgctgggctcccgccagcgcgagaagatgcagcgcctgcgcaagtggaacgag
cgattccggacccgcgactcgaaggagcgcaacctcaagcaggcgctcggcgaaatcgac
cggatggcctccgcgctcggcctcccgaacaacgtccgggaaaccgcgtcggtcatctac
cggcgcgcgctcgacgaggacctcctgcccggacggtccatcgagggcgtctcgaccgcc
tgcgtctacgccgccgcccgacaggccggcgttccgcggagcctcgacgagatcggcgac
gtgagccgagtcgagaagagcgaggtcgctcggacgtaccgctacgtcgtccgcgaactc
agcctcgaagtcaagcccgccgaccccgagagctacgtcccgcggttcgcctccggtctc
ggcctctccgacgaggccgaacaccgtgcccgcgaactgctccggaccgccaaggagcag
ggcgtccacagcggcaagtcgccggtcggcctcgccgcagccgccgtctacgccgccgcg
ctcctgaccaacgagaagaccacccaggcggaggtcagcgacgtggccgacatcagcgag
gtcaccatccggaaccgctaccacgaactgctcgaagccgaggaagcgcccgcggccatc
tga
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