Halorussus vallis: NGM07_18730
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Entry
NGM07_18730 CDS
T09372
Name
(GenBank) DNA double-strand break repair ATPase Rad50
KO
K03546
DNA repair protein SbcC/Rad50
Organism
haxy
Halorussus vallis
Brite
KEGG Orthology (KO) [BR:
haxy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haxy03400
]
NGM07_18730
DNA repair and recombination proteins [BR:
haxy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NGM07_18730
Archaeal homologous recombinant proteins
NGM07_18730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_13
AAA_15
AAA_27
AAA_29
SMC_N
AAA_21
ATG16
ABC_ATPase
Baculo_PEP_C
Fez1
ABC_tran
MukB
ZnF_RZ-type
CCDC93_CC
Motif
Other DBs
NCBI-ProteinID:
USZ75454
LinkDB
All DBs
Position
complement(3689504..3692170)
Genome browser
AA seq
888 aa
AA seq
DB search
MRFERIRLQNFKCYADADLELDAGVTVIHGLNGSGKSSLLEACFFALYGAKALDKTLDDV
VTIGAEDAEVELWFAHGGGSYRVHRRIRATGERAVTAKCVLETPEDTVEGARDVRREIAK
LLRMDSEAFVNCAYVRQGEVNKLINATPAQRQDMIDDLLQLGKLEEYRERASDARLGVKS
VLDDKRGGLSNIENQIADKEAQNLHGRLNDLESKRSQAEEEIEHFEEQRATAEQTRDQAV
DVLDSYEAKREELDSLDEDVEELQAEIGETEQERTEHRERIKELRERTDELEAEIDALLA
DTDVDSATESAVEDRLAELSEADDELEGELSDAKTKAQMFGNQADNLSQRADDFERQATE
KRERAEKLETEADEVEADLRNRREKLERLDEDIEVEREKFADASVEFGEAEAALEDRREK
REELRTRIQDVKADLQSARDSVAEAERLLEEGKCPECGQSVEDSPHVDTLADDRERVAEL
EAELDDLREERDAAAEAVERAQALADAESEVARLCENRELAEESVEDREATVVEKREEAE
ELRAEADELQSEVDDKREAAEELREKADDHRERVKELEAEREAVADERERVESIRTLRRK
VEDAEDEVERHREKRAHLEEMNDQRRERLAEKRDRRAELRESYDEQKVQTAREDRERAEN
YIERVDAKLEQLRENRDELIDRIGGVKSEIQELEDLRDRRDGICEKVDALESLHEETESL
EGMYGDLRAELRQRNVESLEEMLNEVFDLVYQNDSYARIELDGEYELTVYQKDGEPLDPE
QLSGGERALFNLSLRCAIYRLLAEGIDGSAPMPPLILDEPTVFLDSGHVSQLVELVESMR
ELGVEQIVVVSHDDELVGAADDVVWVEKNSVTNRSQVERRDALLEAAD
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
gtgaggttcgagcgcatccgcctgcagaacttcaagtgctacgccgacgccgacctggaa
ctcgacgccggcgtgacggtcatccacggcctcaacggcagcgggaagtcctcgctgtta
gaggcgtgcttcttcgcgctctacggcgcgaaagccctcgacaagacgctcgacgacgtg
gtgaccatcggtgcggaggacgccgaggtcgaactctggttcgcccacggtggcggctcc
taccgcgtccaccgcaggattcgcgcgaccggcgaacgcgcggtcaccgccaaatgcgtc
ctcgaaacgcccgaggacaccgtcgagggtgcccgagacgtccgccgagagatcgcgaaa
ctcctccgaatggactcggaggcgttcgtcaactgtgcctacgtccggcagggcgaggtt
aacaaactcatcaacgcgaccccggcccagcgccaggacatgatcgacgacctcctccaa
ctcggtaaactggaggagtaccgcgagcgcgccagcgacgcccgcctcggggtcaagagc
gtgctggacgacaaacgcgggggcctctcgaacatcgagaaccagatagcggacaaggag
gcccagaacctccacgggcggctcaacgacctcgaatcgaagcggagccaggccgaggag
gagatcgagcacttcgaggaacagcgcgcgaccgccgaacagacccgcgaccaggctgtc
gacgtgctcgactcctacgaggctaagcgcgaggaactcgattccctggacgaggacgtc
gaggagcttcaggccgaaatcggcgaaaccgaacaagagcggaccgaacaccgcgagcga
atcaaggaactccgcgagcgaaccgacgaactggaggcggaaatcgacgcgctgctcgcc
gacaccgacgtcgattcggcgaccgagtcggccgtcgaagacaggctggccgaactgagc
gaggccgacgacgaactcgaaggggaactgagcgacgcgaagacgaaggcccagatgttc
ggcaatcaggccgacaacctgagccagcgggccgacgacttcgagcggcaggcgaccgag
aagcgcgagcgcgccgagaaactcgaaaccgaggccgacgaggtcgaagccgacctccga
aaccgacgcgagaaactggagcgactggacgaggacatcgaggtcgagcgcgagaagttc
gccgacgcctcggtcgagttcggcgaggccgaggcggccctcgaagaccgccgcgagaag
cgcgaggagttgcgaacccgtatccaggacgtgaaggccgacctccagagcgcccgcgat
agtgtggccgaggccgagcgactgctcgaagagggcaagtgccccgagtgcggtcagtcg
gtcgaggactccccgcacgtcgacacgctggccgacgaccgcgagcgcgtcgcggaactg
gaggcggaactcgacgacctccgcgaggagcgggacgccgccgccgaggcggtcgagcgg
gcccaggcgctcgccgacgccgagagcgaggtcgcgcgcttgtgcgagaaccgggaactg
gccgaggagtcggtcgaggacagggaagcgaccgtcgtcgagaagcgcgaggaggccgag
gaactccgtgccgaagcagacgaacttcaatcggaggtcgacgataagcgcgaggccgcc
gaggaactcagagagaaggccgacgaccaccgcgagcgtgtcaaagaactggaggccgag
cgcgaggcggtggccgacgagcgcgaacgcgtcgaatcgattcggaccctccggcggaag
gtcgaagacgccgaggacgaggtcgagcgccaccgcgagaagcgcgctcacctcgaagag
atgaacgaccagcgccgcgagcgcctcgccgagaagcgcgaccggcgggccgaactgcgc
gagtcctacgacgaacagaaggtccagaccgcccgcgaggacagggagcgcgccgagaac
tacatcgagcgggtcgacgcgaaactggagcaactccgggagaaccgcgacgaactcatc
gaccgaatcggcggggtgaagtccgagattcaggaactcgaagatctccgagaccgtcgc
gacggaatctgcgagaaggtcgacgccctcgaatcactccacgaggaaaccgagtcactg
gaggggatgtacggcgacctccgggcggagctccgccagcgcaacgtcgagagcttagaa
gagatgctgaacgaggtgttcgacctcgtctaccagaacgactcgtacgcgcgcatcgaa
ctcgacggcgagtacgaactcaccgtctaccagaaggacggcgaaccgctcgaccccgaa
cagctctcgggcggcgagcgcgcgctgttcaacctcagtctgcggtgtgccatctaccgg
ctcctcgcggagggcatcgacgggtcggcgccgatgccgccgctgatactggacgagccg
acggtgttcctcgattcgggccacgtctcccagttggtcgaactcgtcgagtcgatgcgc
gagttgggcgtcgaacagatcgtggtcgtgagccacgacgacgaactggtcggggcggcc
gacgacgtggtgtgggtcgagaagaactcggtgacgaaccgctcgcaggtcgagcgccgg
gacgcgctcctcgaagcggccgactga
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