Halorussus vallis: NGM07_22240
Help
Entry
NGM07_22240 CDS
T09372
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
haxy
Halorussus vallis
Pathway
haxy03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
haxy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NGM07_22240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haxy03021
]
NGM07_22240
Transcription machinery [BR:
haxy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
NGM07_22240
Prokaryotic type
Archaeal type
TFB
NGM07_22240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Ribosomal_S27e
Zn_Ribbon_YjdM
Sigma70_r4
Cyclin_N
A2L_zn_ribbon
Rcat_RNF216
Zn_ribbon_LysW
Cyclin_C
DZR_2
Motif
Other DBs
NCBI-ProteinID:
USZ77902
LinkDB
All DBs
Position
unnamed1:complement(452979..453938)
Genome browser
AA seq
319 aa
AA seq
DB search
MTGSTRQREREQTEETGASEGERMCPECESEAVVSDAGGSELVCEECGLVVEERNVDRGP
EWRAFNTAERNKKSRVGAPTTNTMHDKGLTTTIDWKDKDAYGRSISSKKRSQMHRLRKWQ
ERIRTKDAGERNLQFALSELNRMASALGVPRSVQEIASVIYRRALKEDLIRGRSIEGVAT
SALYAACRKEGIPRSLEEVAEVSRVERKEIGRTYRYVSQQLGLEMEPVDPKKYVPRFSSE
LDLSEEVQSKANEIIDVTTEQGLLSGKSPTGYAAAAIYAASLLCNEKKTQREVADVAQVT
EVTIRNRYQEQIKAIGLYN
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgactgggtccactcgccagcgcgagcgtgaacagaccgaagagaccggggcgtccgaa
ggcgagcggatgtgtcccgagtgcgaatccgaggcggtcgtctccgacgctggcgggagc
gaactcgtgtgcgaggagtgcggactggtggtcgaggaacgcaacgtggaccgcggaccc
gagtggcgcgcgttcaacacggccgagcgcaacaagaagtcccgggtgggcgcgccgacc
acgaacacgatgcacgacaaggggctgaccacgaccatcgactggaaggacaaggacgcc
tacggccgttctatctcctcgaagaagcggagccagatgcaccgtctgcgcaaatggcag
gagcgcatccggacgaaggacgcgggcgagcgcaatctccagttcgcgctcagcgaactc
aaccggatggcctcggcgctcggcgtcccccggtctgtacaggagatagccagcgtcatc
taccggcgggcgctcaaggaggacctcatccgggggcgctccatcgagggcgtcgccacc
agcgcgctctacgccgcctgtcggaaggagggcatcccgcgaagcctcgaagaggtcgcg
gaagtcagccgggtcgagcgcaaggagatcggccggacgtatcggtacgtctcccagcaa
ctcggcctggagatggaaccggtcgacccgaagaagtacgtcccgcggttcagttccgaa
ctcgacctctccgaggaggtacagtcgaaggccaacgagatcatcgacgtgaccaccgag
cagggcctgttgtcgggcaagtcgccgacggggtacgcggcggcggccatctacgccgca
tcgctactctgcaacgagaagaagacccagcgcgaggtcgccgacgtcgcgcaggtcacc
gaggtcaccatccgcaaccgctaccaggagcagatcaaggccatcggactttacaactga
DBGET
integrated database retrieval system
