KEGG   Halorussus gelatinilyticus: M0R88_01170
Entry
M0R88_01170       CDS       T08255                                 
Name
(GenBank) RtcB family protein
  KO
K14415  tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
Organism
haxz  Halorussus gelatinilyticus
Brite
KEGG Orthology (KO) [BR:haxz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:haxz03016]
    M0R88_01170
Enzymes [BR:haxz01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     M0R88_01170
Transfer RNA biogenesis [BR:haxz03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    M0R88_01170
 Prokaryotic type
   tRNA splicing ligases
    M0R88_01170
SSDB
Motif
Pfam: RtcB
Other DBs
NCBI-ProteinID: UPW00728
UniProt: A0A8U0IIV1
LinkDB
Position
234482..235960
AA seq 492 aa
MTSDDAGETYDAGEVTLHKVRDYVWEIPKEGDMRVPARVLASETLLDQIADDKTLEQLKN
STHLPGVRKHNVCMPDGHQGYGFPVGGVAGIDAEEGCISPGAVGYDINCGVRMMKTDLTY
EDVQGREEELLDALFANVPSGLGGGGIVEGDMDAVEAILDRGMEWALEEGWAVEEDLAHC
EDEGVRHDSDPAKVSQKAKDRGKNQIGSLGSGNHFLEVQRVTDTYLDDVADAYGLEEGQI
VVLIHCGSRGLGHQVCTDYLRDIEKAHAGLLDQLPDKELAAAPAGSHLAEDYYDAMCACI
NFAWVNRQLIMHRTRQVFEKVFDSEWESLGMDLLYDVAHNIAKKETHTVEDGEERELFVH
RKGATRAFPAGHEEVPGAYLDVGQPIIIPGSMGAGSYVLRGGEESMDQTFGSTAHGAGRT
MSRTQAKKDYWGGDVQDELEQEHIYVKAQSGATVAEEAPGVYKDVDEVVRVSDALGIGDK
VARTFPVCNIKG
NT seq 1479 nt   +upstreamnt  +downstreamnt
atgaccagcgacgacgcaggagagacctacgacgcgggcgaggtcacgctccacaaggtc
cgtgactacgtctgggagattccgaaggagggcgacatgcgcgtcccggcgcgcgtgctc
gccagcgagaccctgctcgaccagatagccgacgacaaaaccctcgaacagctcaaaaac
tcgacccatctgccgggcgtccggaagcacaacgtctgcatgcccgacggccatcagggg
tacggcttcccggtcggcggcgtggccggcatcgacgccgaggagggctgtatctcaccg
ggagcggtcggctacgatatcaactgcggcgtccggatgatgaagaccgacctcacctac
gaggatgtgcagggccgcgaggaggaactgctcgacgccctgttcgccaacgttccgtcg
ggactcggcggcggcggtatcgtcgaaggcgacatggacgccgtggaagccatcctcgac
cgcgggatggagtgggcgctcgaagagggctgggccgtcgaagaggacctcgcgcactgc
gaggacgagggcgtgcgccacgattcggaccccgcgaaggtctcccagaaggccaaggac
cgcgggaagaaccagatcgggagcctcgggtcgggcaaccacttcctcgaagtccagcgc
gtgaccgacacgtacctcgacgacgtggccgacgcctacggactggaggagggccaaatc
gtcgtcctcatccactgcgggagccgcgggttgggccatcaggtctgcaccgactacctc
cgagacatcgagaaggcccacgccggactgctcgaccagttgcccgacaaggaactcgcc
gccgcgccagcggggagccacctcgcggaggactactacgacgcgatgtgcgcctgcatc
aacttcgcgtgggtgaaccgccaactcatcatgcatcgcacgcgccaggtgttcgagaag
gtcttcgactccgagtgggagtcgctgggcatggacctgctgtacgacgtggcccacaac
atcgccaagaaggagacgcatacggtcgaagacggcgaggaaagagagttgttcgtccac
cggaagggcgcgaccagagccttccccgcgggccacgaggaggtccccggcgcgtacctc
gacgtgggccagcccatcatcatccccggcagcatgggcgcggggagctacgtcctccgg
ggcggcgaggagtcgatggaccagacgttcggttcgacggcccacggcgcgggccggacg
atgagtcggacgcaggccaagaaggactactggggcggcgacgtgcaggacgaactcgaa
caggaacacatctacgtcaaggcccagagcggtgccacggtcgccgaggaagcgccgggc
gtctacaaggacgtggacgaagtcgtccgggtctcggacgcgctgggcatcggcgacaag
gtggcgcggacgttccccgtctgtaacatcaaggggtag

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