Halorussus gelatinilyticus: M0R88_02155
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Entry
M0R88_02155 CDS
T08255
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
haxz
Halorussus gelatinilyticus
Pathway
haxz04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
haxz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
M0R88_02155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haxz03019
]
M0R88_02155
03009 Ribosome biogenesis [BR:
haxz03009
]
M0R88_02155
04131 Membrane trafficking [BR:
haxz04131
]
M0R88_02155
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
haxz04147
]
M0R88_02155
Messenger RNA biogenesis [BR:
haxz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
M0R88_02155
Ribosome biogenesis [BR:
haxz03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
M0R88_02155
Membrane trafficking [BR:
haxz04131
]
SNARE
SNARE associated proteins
Others
M0R88_02155
Autophagy
Aggrephagy
Other aggrephagy associated proteins
M0R88_02155
Exosome [BR:
haxz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
M0R88_02155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
CDC48_N
AAA_lid_3
CDC48_2
AAA_16
RuvB_N
AAA_5
AAA_22
TIP49
AAA_2
AAA_33
NPHP3_N
AAA_14
nSTAND3
RNA_helicase
AAA_28
IstB_IS21
Sigma54_activat
Mg_chelatase
AAA_7
AAA_18
ABC_tran
AAA_17
ATPase
DUF815
AAA_3
NB-ARC
Parvo_NS1
AAA_24
AAA_30
TsaE
AAA_11
Vps4_C
SLFN-g3_helicase
AAA_lid_PRS2_C
NACHT
ResIII
Sigma54_activ_2
PhoH
IPT
DUF6985
Motif
Other DBs
NCBI-ProteinID:
UPW00918
UniProt:
A0A8U0IJG0
LinkDB
All DBs
Position
415359..417584
Genome browser
AA seq
741 aa
AA seq
DB search
MNEVQLEVAKAYPNDSGRGIARLDPDTLLHLKLSPGDIIEIEGGDTTAAKVWRADRQDWN
TDTVRIDGFTRQNADVGIGERVEIRKAEAEKADKLVLAPPEEASVQFGSDAAGMVKRQIL
KRPVVERDIVPVMSSTNHPFMRSPGQAIPLIAVETDPDGVCLITEDTEVELREEPISGFE
KTGGGITYEDIGGLENEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLA
KAVANETSASFFSIAGPEIISKYYGESEQQLREIFEDATEESPSIIFIDELDSIAPKRED
VTGEVERRVVAQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDET
GREEILQIHTRGMPLSDDVNLGSLANDTHGFVGADIESLTKEAAMKALRRYLPEIDLDEE
DIPPSLIDRMIVKRQDFNGALNEVEPSAMREVLVELPKISWDDVGGLEQAQQEVKESVEW
PLSSPEKFQRMGINPPSGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGES
EKAIRQTFRKARQVSPTVIFFDELDSLAPSRSQEMGSNVSERVVNQLLTELDGLEEKGDV
MVIGATNRPDMIDPALIRSGRFDRLVMIGQPDKEGREQILKIHTDDTPLSADVSLREIAE
ITDGYVGSDLESIGREAAIEALREDDDATEVEMRHFRQAMENVRPTITEDLLDYYEQMKD
EFKGGSSSPTQGQRSGRIGFQ
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaagtccaactagaggtggcaaaggcgtacccgaacgattcgggtcgcggtatc
gcccgtctcgacccggacacgctgttgcatctaaagctcagtccgggcgacatcatcgaa
atcgaaggcggcgacacgaccgccgcgaaggtctggcgtgcggaccgtcaagactggaac
accgacaccgttcgcatcgacggcttcacccggcagaacgccgacgtgggcatcggcgag
cgcgtggaaatccggaaggccgaggccgagaaggccgacaaactggtcctcgcgccgccc
gaggaggccagcgtccagttcggctccgacgcggccgggatggtcaagcgccagattctc
aagcgcccagtggtcgagcgcgacatcgtccccgtgatgtcctcgaccaaccacccgttc
atgcggtcgcccggtcaggcgattccgctcatcgcggtcgagaccgaccccgacggcgtc
tgtctcatcaccgaggacaccgaagtcgagttgcgcgaagagccgatttcgggcttcgag
aagaccggcggcggcatcacctacgaggacatcggcggtctcgaaaacgaaatccagcgc
gtccgggagatggtggaactcccgatgaagcatccccagattttcaagaaactgggcatc
gaaccgccacaaggcgtcctgctccacggcccgccgggtaccgggaagacgctgctcgcc
aaggcagtggccaacgagacgtccgcgagcttcttctccatcgcgggtcccgaaatcatc
tcgaagtactacggcgagtccgagcaacagctccgggagatattcgaggacgccaccgag
gagtcgccctccatcatcttcatcgacgagttggactccatcgccccgaagcgcgaggac
gtgaccggcgaggtcgaacgccgggtggtcgcccagttgctgacgatgatggacggcctc
gaatcgcggggccaggtcatcgtcatcgcggcgaccaaccgcgtggactcggttgacccg
gcgctccggcgtcccggccggttcgaccgcgagatagaaatcggcgtgcccgacgagacc
ggccgcgaggaaattctccagattcacacccgcgggatgcccctctcggacgacgtgaac
ctcgggagcctcgccaacgacacccacggcttcgtcggcgcggacatcgagagcctgacg
aaggaggccgcgatgaaggcgctgcgccggtacctccccgaaatcgacttggacgaggag
gacatcccgccgagcctcatcgaccggatgatagtcaagcgccaggacttcaacggggcc
ttgaacgaggtcgaaccctccgcgatgcgcgaggtcctcgtggaactcccgaagatttcg
tgggacgacgtgggcggtctcgaacaggcccaacaggaggtcaaagagagcgtcgagtgg
cccctctcctcgccggagaagttccagcgcatgggtatcaacccgccgagcggcgtcctg
ctgtacggcccgcccggcacgggcaagaccctgatggcgaaggcggtggccaacgagacc
aacgccaacttcatctcggtccgcggcccgcaactgctctcgaagtgggtcggcgagtcc
gagaaggccatccgccagacgttccggaaggcccgacaggtctccccgaccgtcatcttc
ttcgacgagttggacagcctcgcgccctcgcgcagtcaggagatgggaagcaacgtctcc
gagcgcgtggtcaaccaactgctcacggaactcgacgggctggaggagaagggcgacgtg
atggtcatcggcgcgaccaaccgcccggacatgatcgacccggcgctcatccgctcgggc
cggttcgaccgcctcgtcatgatcggccagccggacaaggagggccgcgagcagatactg
aagattcacaccgacgacacgccgctgtcggccgacgtgagtctgcgcgaaatcgccgaa
atcaccgacggctacgtgggtagcgacctcgaatccatcgggcgcgaggccgccatcgag
gcgctccgcgaggacgacgacgccacggaagtcgagatgcgccacttccggcaggcgatg
gagaacgtccgcccgaccatcaccgaggacctgttggactactacgagcagatgaaagac
gagttcaagggcggctcgtccagcccgacgcaggggcagcgcagcgggcgcatcggcttc
caataa
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